| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1349 |
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| Symbol | |
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| ID | 6409006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1420655 |
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| End bp | 1421941 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711248 |
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| Product | Three-deoxy-D-manno-octulosonic-acid transferase domain protein |
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| Protein accession | YP_001990364 |
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| Protein GI | 192289759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.261373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCC GCGTCTATCG CAAGTTGACC GCTGCCGCGG CGCCGCTGGC GTCGCTGTGG
ATCGGCCGGC GGCTGAAGCA GGGCAAGGAA GATCCAGCCC GGGTCGGCGA GCGTCGCGGT
CTCAGCAACG ATGCGCGACC GCGTGGACCG GTGGTGTGGA TCCACGGTGC CAGCGTCGGC
GAAGTGCTGG CTGCAGCCGG ACTGATCGCA CGGTTGCGCG CGCTCAACCT GCGCATCCTG
CTCACCTCCG GCACGCTGAC TTCGGCCCAG GTGGTGGCCA GCCGGTTTCC GCCGGACATC
ATCCACCAGT TCATTCCCTA CGACGCGCCG CGCTTCGTTG ATCGCTTCCT CGATCACTGG
CGTCCGAGCC TGGCGTTGTT CATTGAATCC GATCTGTGGC CGAACCTGAT CCTGGCCGCC
TCGGCCCGGC GGGTGCCGAT GGTGCTGATC AACGGCCGGA TGTCGCAGCG CTCGTTCCCG
CGCTGGCAGC GTGCGTCCGC AACCATCGGC GCGCTGCTCG GCCGGTTCGA TATTTGTCTG
GCGCAGTCTC GCGTCGATGC CGAACGTTTC AGCGCGCTCG GCAGCCCGAG CGTGATCACC
ACCGGCAATC TGAAGATGGA TGTCGCGCCG CCGCCGGCCG ATCCGGGCCG GCTGGAGCGG
CTGCTCGCGG TCACCCGTGG CCGCCCGGTG ATCGTCGCCG CCTCGACTCA TCCGGGCGAG
GAAGAACTGC TGGTGGAAGC GCATCGCAGG CTGTCCGCGA GCTTCCCGAC GCTGCTGACG
GTGATCGTGC CGCGGCATCC GCATCGCGGC GAGCAGGTCG CCGGTCTTGT CGAGGCCGCC
GGCCTGCCGG TGGCGCTGCG CTCGCGCGAG CAGCAGCCGA TGGCTGCGAC CGCGATCTAC
GTCGCCGACA CCATGGGCGA ACTCGGGCTG TTCTATCGGC TGGCGCCGAT CGTGTTCATG
GGTGGCTCGC TGGTCGAGCA CGGTGGCCAG AATCCGATCG AGGCGGTGAA GCTTGGCGCC
GCGATCGTGC ATGGCCCGCA CGTCTCCAAT TTCACCGAAG TCTATCGCGC GCTCGACGAT
GAAGGCGGTG CATTCGCCGT GTCCGACGTC GACGCGCTGG TGCTGCGGGT CTCGTCGCTG
CTGTCGAACC ACGACGCGCG GCAGATCTCG ATCACCGCGG CCACCAACGT GGTCGACCGC
CTCGGCGGCG CGCTCGACCG CACCATCGCG GCGCTCGAGC CCTATCTGCT GCAATTGCAG
ATCGAACAGG GCGCCGCGAA TGCGTGA
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| Protein sequence | MTLRVYRKLT AAAAPLASLW IGRRLKQGKE DPARVGERRG LSNDARPRGP VVWIHGASVG
EVLAAAGLIA RLRALNLRIL LTSGTLTSAQ VVASRFPPDI IHQFIPYDAP RFVDRFLDHW
RPSLALFIES DLWPNLILAA SARRVPMVLI NGRMSQRSFP RWQRASATIG ALLGRFDICL
AQSRVDAERF SALGSPSVIT TGNLKMDVAP PPADPGRLER LLAVTRGRPV IVAASTHPGE
EELLVEAHRR LSASFPTLLT VIVPRHPHRG EQVAGLVEAA GLPVALRSRE QQPMAATAIY
VADTMGELGL FYRLAPIVFM GGSLVEHGGQ NPIEAVKLGA AIVHGPHVSN FTEVYRALDD
EGGAFAVSDV DALVLRVSSL LSNHDARQIS ITAATNVVDR LGGALDRTIA ALEPYLLQLQ
IEQGAANA
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