| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1317 |
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| Symbol | |
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| ID | 6408974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1385066 |
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| End bp | 1386982 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711216 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001990332 |
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| Protein GI | 192289727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCA ATCTGCGCAA TTTCGCCCTC TGGGTCATCA TCGTGCTGCT GCTGTTGGCG
CTGTTCACGC TCTTCCAGAA TCCGGGCCAG CGCACCGCGT CGCAGGAAAT TCCGTTCTCG
CAGCTCCTCA GCGAGATCGA CCAAAATCAC GTTCGGGACG TGGTGATCCA GGGCCAGGAA
ATCCGTGGCA CCTTCACCAA CGGCTCGACC TTCCAGACCT ACGCGCCGAA CGATCCGTCG
CTCGTGACCC GCCTGTACAA CGGCAAGGTG TCGATCACCG CCAAGCCGCC GGGTGACAAC
GTGCCGTGGT TCGTGTCGCT GCTCGTGTCC TGGCTGCCGT TCATCGCGCT GATCGGCGTG
TGGATCTTCC TGTCGCGGCA GATGCAGGGC GGCGCCGGCA AGGCGATGGG CTTCGGCAAG
TCGCGCGCCA AGATGCTGAC CGAAGCGCAC GGCCGCGTGA CGTTTGAAGA CGTCGCCGGC
GTCGACGAGG CCAAGCAGGA CCTGCAGGAG ATCGTCGAGT TTCTGCGCGA CCCGGGCAAA
TTCCAGCGTC TCGGCGGCCG CATTCCGCGC GGCGTGCTGC TGGTCGGCCC TCCCGGTACT
GGTAAGACCC TGATCGCGCG TGCGGTCGCG GGTGAAGCCA ACGTGCCGTT CTTCACCATC
TCCGGTTCGG ACTTCGTCGA AATGTTCGTC GGCGTCGGCG CCTCTCGTGT GCGTGACATG
TTCGAGCAGG CCAAGAAGAA TGCTCCGTGC ATCATCTTCA TCGACGAAAT CGATGCGGTC
GGTCGTCATC GCGGCGCAGG TCTCGGCGGT GGCAATGACG AACGCGAGCA GACCCTCAAC
CAGTTGCTGG TCGAGATGGA CGGCTTCGAG GCCAATGAGG GCGTGATCCT GATCGCCGCC
ACCAACCGGC CCGACGTGCT CGATCCCGCG CTGCTGCGTC CCGGCCGCTT CGACCGTCAG
GTCGTGGTGC CGAATCCGGA CGTCGTCGGC CGCGAGCAGA TCCTCAAGGT CCACGTTCGC
AAGGTGCCGC TGGCGCCCGA TATCAACCTG AAGAACATCG CGCGCGGCAC TCCGGGTTTC
TCGGGCGCCG ACCTGATGAA CCTCGTCAAC GAAGCGGCGC TGATGGCGGC CCGGCGCAAC
AAGCGCATGG TCACTCAGTC CGAGTTCGAA GACGCCAAGG ACAAGGTGAT GATGGGCGCC
GAGCGCAAGT CGCTGGTGAT GACGGAAGAG GAGAAGCTCC TCACCGCGTA TCACGAAGGC
GGCCACGCCA TCGTCGGCCT CAACGTTCCG GCGACCGACC CGATCCACAA GGCGACCATC
ATTCCGCGCG GCCGTGCGCT CGGCATGGTG ATGCAGCTCC CCGAGCGCGA TAAGCTGTCG
ATGTCGCTCG AGCAGATGAC CTCGCGTCTC GCCATCATGA TGGGCGGTCG CGTCGCTGAG
GAGATGGTGT TCGGCCGCGA GAAGGTGACT TCCGGTGCCG CATCCGACAT CGAACAGGCG
ACCAAGCTGG CGCGGATGAT GGTGACCCGT TGGGGCCTGT CGGAAGAGCT CGGCACCGTC
GCTTACGGTG AGAACCAGGA CGAAGTGTTC CTCGGCATGT CGGTGTCGCG CACTCAGAAC
GCGTCCGAGG CGACGATCCA GAAGATCGAC GCCGAGATCA AGCGGCTAGT CGAAGAGGGC
TACAACGAGG CCAAGCGTAT CCTCACCGAG CGTCGCGCCG ACCTCGAAGC GCTGGCCAAG
GGCCTGCTCG AATACGAGAC CCTGACCGGT GACGAGATCA CCGACCTGAT CAACGGCAAG
AAGCCGAACC GCGAATCGGT GCTGGAGCCG TCGGGCCCCC GCACCTCGGC GGTGCCGCCG
GCCGGCAAGC CGCGGCCGCG GCCCGATCCG GGCCTGGAGC CGCAGCCCCA GGCGTAA
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| Protein sequence | MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RTASQEIPFS QLLSEIDQNH VRDVVIQGQE
IRGTFTNGST FQTYAPNDPS LVTRLYNGKV SITAKPPGDN VPWFVSLLVS WLPFIALIGV
WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK
FQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM
FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA
TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDINL KNIARGTPGF
SGADLMNLVN EAALMAARRN KRMVTQSEFE DAKDKVMMGA ERKSLVMTEE EKLLTAYHEG
GHAIVGLNVP ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE
EMVFGREKVT SGAASDIEQA TKLARMMVTR WGLSEELGTV AYGENQDEVF LGMSVSRTQN
ASEATIQKID AEIKRLVEEG YNEAKRILTE RRADLEALAK GLLEYETLTG DEITDLINGK
KPNRESVLEP SGPRTSAVPP AGKPRPRPDP GLEPQPQA
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