Gene Rpal_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1304 
Symbol 
ID6408961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1371495 
End bp1372199 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID642711203 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001990319 
Protein GI192289714 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGC GCAAGGAACA GGGCCGCGCC GAGCGCGGCT ACCATCACGG CAATCTCAAG 
GAAGCGCTGC TGCAGGCAGC GCTTGGGCTG ATCGCGGAGA AGGGCCCCGG CGGCTTCACC 
TTCGCCGACG CCGCGCGGAT GGCCGGCGTC AGCCCGGCTG CGCCGTATCG CCATTTCCGC 
GATCGCGACG AGCTGCTGTC CAACATCGCT CAGCGCGGCT TCGAACTGTT CGAACAGGTG 
CTGACGAAAG CCTGGGACGA CGGCCGTCCC GACACCGTCA CCGCGTTCAT GCGGGTCGGG 
CGGGCCTATC TGGCGTTCGC CCGGAGCGAG CCGGCGTACT ATTCGGCGAT GTTCGAATCC 
GGTGTTCCGA TTGACGTTAA TCCGATGCTT CTGACCGCTT CGGAACGCGC CTTCAACGTG 
ATCCGCGCCG CTGCCGAGCG TCTGGCGGCG TTGACACCGC CCGGCGTGAC CCGGCCGCCG 
GCGCTGATGA TGGCGTTGCA CATCTGGTCG ATGTCGCACG GCATAGCCTC GCTGTTCGGC 
CGCGGCGATG CCGCGCGGCG CAAACTGCCG ATGGCGCCCG AGGAGCTGCT GGAGGCCAGC 
GTGCTGATCT ACCTGCGGGG TCTCGGGTTC TCGGCCGACT CTGCGTCGGC GGCAGAAAAG 
CCTGCACAAC CAAAGCGATC CGGCCCCTGG GGCCCGGCTG CTTGA
 
Protein sequence
MSWRKEQGRA ERGYHHGNLK EALLQAALGL IAEKGPGGFT FADAARMAGV SPAAPYRHFR 
DRDELLSNIA QRGFELFEQV LTKAWDDGRP DTVTAFMRVG RAYLAFARSE PAYYSAMFES 
GVPIDVNPML LTASERAFNV IRAAAERLAA LTPPGVTRPP ALMMALHIWS MSHGIASLFG 
RGDAARRKLP MAPEELLEAS VLIYLRGLGF SADSASAAEK PAQPKRSGPW GPAA