Gene Rpal_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1255 
Symbol 
ID6408911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1332210 
End bp1332866 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID642711153 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_001990270 
Protein GI192289665 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.454095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG GACCTCGCGT CGGTACCGAC GGTCTCATGC GCTGTCCGTG GCCGGGCGAC 
GATCCGCTCT ATGTCGCGTA TCACGACACC GAATGGGGCG TGCCGGAATA CGACGACCGC 
GCACTGTACG AGAAGCTGAT CCTCGACGGT TTTCAGGCCG GGCTGTCGTG GATCACGATC 
CTGCGCAAGC GCGATAACTT CCGCCGCGCC TTCGACGATT TCGATCCGGC CAAGATCGCC 
CGCTACGACG CCGACAAGGT CGCGGCGCTG ATGAACGACG TCGGCATCGT CCGCAACCGC 
GTCAAGATCG AGGGCACGAT TGGCAGCGCC AAAGCGTGGC TGAAGATTCA GGAAGAAGGC 
CCGGGTTTCT CGAAGCTGCT GTGGGACTTC GTCGGCGGCA CGCCGAAAAT CAACACCTTC 
AAGACCACCG CGGGCGTGCC GGCCTCGACG CCGCTGTCGG TGAAGATCTC CAAGGATCTA 
TCGGCACGCG GCTTCAAGTT CGTCGGGCCG ACGATCGTGT ACGCGTTCAT GCAGGCGGTC 
GGGATGGTCA ACGACCATCT GGTCGACTGT CACTGCCACG CCACCTGCGG GCAGATGAAA 
AAACCGGCGC GGCGTTCTGC GGCGCCGGCG AAGAGGGCTT CGTTACGTCA GCGCTGA
 
Protein sequence
MTRGPRVGTD GLMRCPWPGD DPLYVAYHDT EWGVPEYDDR ALYEKLILDG FQAGLSWITI 
LRKRDNFRRA FDDFDPAKIA RYDADKVAAL MNDVGIVRNR VKIEGTIGSA KAWLKIQEEG 
PGFSKLLWDF VGGTPKINTF KTTAGVPAST PLSVKISKDL SARGFKFVGP TIVYAFMQAV 
GMVNDHLVDC HCHATCGQMK KPARRSAAPA KRASLRQR