Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1245 |
Symbol | |
ID | 6408901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1321153 |
End bp | 1322028 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642711143 |
Product | nicotinate-nucleotide pyrophosphorylase |
Protein accession | YP_001990260 |
Protein GI | 192289655 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.651391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCGT CTGCCCTGCT GCATCCCGAT GCATTCCTGT CGCCATTGGC GATCACCGAC GCTGTGCGGC GCGCGCTCGA CGAGGATCTC GGCCGTGCCG GCGACGTCAC CTCGGTCGCA ACGATTCCGG AAGCAACCCA AGCGCACGCG ATCCTGGTGG CGCGCCAGGC CGGCGTGATC GCAGGATTGC CGCTGGCGAT CGAGACGTTT CGCCAGCTCT CGACGGACGT CGCCATCACC GCGCATGCGC GCGACGGCGA CACTGTGGCG GCGGGCATTC AGGTGCTGAC GATCTCGGGC CCGGCCCGCG CCGTGCTCAC CGGCGAGCGT ACCGCGCTGA ACTTCGTCGG CCGGCTGTCG GGCATTGCGA CGCTGACCGC GGACTACGTC CGCCACACCG CAGGCACCAA GATGCGGATC TGCTGCACCC GCAAGACCAC GCCGGGGCTG CGCGCGCTGG AGAAATACGC GGTGCGCTGC GGCGGCGGCT TCAACCACCG CTTCGGCCTC GACGACGCCA TCCTGATCAA GGACAACCAC ATCGCGGTGG CCGGCGGCAT CCGACCGGTG CTGGAAGCGG CGCGCGCCAA GATCGGCCAT CTGGTCAAGA TCGAGATCGA GGTCGACACG CTCGATCAGC TGCGCGAGGT GCTCGACACC AATCTTGCCG ACGTCGTGCT GCTCGACAAC ATGGATCTCG ACACGCTGAA GAAAGCGGTG GCGATGAGCG CCGGCCGCGT CGTGCTCGAA GCTTCCGGCG GCGTCACCCG CGAGTCGATC AGCAGCATCG CCGCAACCGG CGTCGACTAC GCCTCCTCCG GCGCGCTCAC ACACTCGGCG CCGAATTTCG ACGTCGCGCT GGATATCGAT GCGTAG
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Protein sequence | MLPSALLHPD AFLSPLAITD AVRRALDEDL GRAGDVTSVA TIPEATQAHA ILVARQAGVI AGLPLAIETF RQLSTDVAIT AHARDGDTVA AGIQVLTISG PARAVLTGER TALNFVGRLS GIATLTADYV RHTAGTKMRI CCTRKTTPGL RALEKYAVRC GGGFNHRFGL DDAILIKDNH IAVAGGIRPV LEAARAKIGH LVKIEIEVDT LDQLREVLDT NLADVVLLDN MDLDTLKKAV AMSAGRVVLE ASGGVTRESI SSIAATGVDY ASSGALTHSA PNFDVALDID A
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