| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1213 |
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| Symbol | |
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| ID | 6408869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1281779 |
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| End bp | 1285003 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711111 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001990228 |
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| Protein GI | 192289623 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.845004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTCG GCATTTCAGG CCGCCTGACC AAGGCCACGA TCCAGTCGCC GCTGACGCCG
CTGTTCCTGC TGGCGTCGCT GATTGCTGGG CTGATCGCGC TCGCCGCGAT CCCGCGCGAG
GAAGAGCCGC AGATCAGCGT GCCGATGGTC GACATCCGCA TCAACGCCGA CGGCCTGCGC
GCCCCGGATG CGGTCGAACT TGTGACCAAG CCGCTGGAGG CGATCGTCAA AGGCATCGAC
GGTGTCGAGC ACGTCTACAG CCAGACCGAA GACGACCGGG TGATGGTCAC CGCGCGCTTT
CTGGTCGGGA CCAAGGCGGA AGACGCGATC CTGCGGGTGC ACGAGAAGAT CCGCGCCAAC
ATCGGCAGCA TCCCGGTCGG CATCCCCGAG CCGCTGATCG TCGGCCGCGG TATCAATGAC
GTTGCCGTCA CCGTGCTGAC GTTGTCGCCG AAACCGGAAG CTGCCGCGCG TTGGACCGAC
AAGGATCTCT ATGAGCTCGC CGACAAGCTG CGCTCCGAGC TGATGAAGGT CGACAGCATC
GGCCTGACCT ACATCTCGGG CGGTGGCGCG CAGCAGATCC GGGTCGAGCC CGATCCGGAA
AAGCTGTCGC TGTACGGCGT CACGTTGCAA CAGCTCGTCG CCAAGGTGAA GGACGCCAAC
CGTTCGTTCC TGGCAGGCAG CGTCCGCGAC GCCGGCACGA TGCGCAGCGT TTCCGCCGGC
CAGACCCTGA TGGGCATTCC CGACATCGGC CTGCTGCTGG TCGCGACCCG CGACAATCGT
CCGGTCTACG TCAAGGACGT CGCGCAAGTG ATCATCGGGC CGAACATGGC CGAGCATCGG
GTGTGGAACG ATGCCCGCGA CGACGCCGGC AAATGGGACC GCGTGCCGGC GGTGACACTT
GCGCTGGCCA AGCGCGCCGG CGCCAATGCG GTGGTCGTGT CGCACGACAT CAAGGCGCGG
CTGGCGACGC TGCAGGGCTC GCTGATCCCG AAGGATGTCG CCGTCACCAT CACCCGCGAC
TACGGCGAAA CCGCCAACGA GAAGGCCAAC GAACTGTTGT TCCATCTCGG CCTTGCGACG
ATCTCGATCG TGGTGCTGAT CGCGATCGCG ATCGGCTGGC GCGAGGCGAT CGTCACTGCG
GTGGTGATCC CGACCACGAT CCTGCTGACG CTCTTCGCGG CGAATTTGAT GGGCTACACC
ATCAACCGCG TCAGCCTGTT CGCGCTGATT TTCTCGATCG GCATCCTGGT CGACGACGCT
ATTGTGGTCG TTGAAAACAT CGCCCGGCAC TGGGGGATGA AGGACGGACG GCCCCGGCTG
CAGGCCACCA TCGAGGCGGT GGCCGAGGTC GGCAATCCGA CCGTGATTGC GACCCTGACC
GTGGTCGCGG CGCTGCTGCC GATGCTGTTC GTGTCCGGGC TGATGGGGCC GTATATGGCG
CCGATCCCAG CCAATGCATC GGCCGCGATG CTGTTCTCGT TCTTCGTCGC CATGATGGTT
GCGCCGTGGC TGATGCTGAA ACTGGCGCCG AAGCAGGGCG TCGCCGGGAC CGGGCATGGC
CACCACGACG AAGGCCGGCT CGGCCGGCTG TATCGCCGTT TCGCATCGCC GATCGTCGCC
TGCAAGCGCG CGTCCTGGAT CTTCCTGCTC GGCGTCGGCA TCGCTACGCT GCTATCGATG
GCGCTGTTCT ACACCAAGTC GGTGACGGTG AAGCTGCTGC CGTTCGACAA CAAGAGCGAG
ATCGCCGTGG TGCTCGATCT GCCCGAGGGC GCCACGCTCG AAGACACCGA GCGTACGCTG
TTCGCGGCGG CCGACATCGC CCGCGGGCTG CCCGAAATCA CCTCGGTGCA GACCTTCGCC
GGCACGCCTG CGCCGTTCAA CTTCAACGGC CTGGTGCGAC ACTATTACTT GCGCGAGCGG
CCCGAACTCG GCGAGCTGCA GGTGAACTTG AAGGAGCGCG GCGAGCGCAG CCGCGCCAGC
CATGACATCG CGCTCGACCT GCGCAAGCGA TTGCAGGCGC TGAAGCTGCC GGAAGGCACC
AGCCTCAAGG TGGTCGAGGT GCCGCCTGGT CCGCCAGTGC TGTCGACGCT GCTGGCGGAA
ATCTACGGCC CCGACGCCGC GACGCGCCGT GCGGTTACCG CCGAGGTCGA GAAAATCTTC
AAGCAGGTGC CGTTCATCGT CGACGTCGAC AATTCGATCG GTGAGCCGCG GCCGCGGCTC
AGGCTGTCGA TCGACCAGGA CCGGCTAGAG TTCTTCGGCG TCGAACAGAA GGACGTCTAT
GACACCGTCC AGGCGCTGTT CGGCGGTACC TCGATCGGCT ACTCGCATCG CGGCGAGGGC
CGCAATCCGA TCGCCATCAC GGTCGGGCTG CCGAAGCGCG ATCTCGAATG GAACGAGGCG
CTGGCCTCGA CGCCGGTACC GGCCAATTCT CTGCCCGGCG CCAAGACGGT GGTCGAACTC
GGCCAACTGG TGAAGGCCAC CAAGGAAGTC GGCTCGCCGA TGATCTTCCG CCGCGATGGC
CGGTTCGCCG ACATGGTGAT GGCCGAGCTC GCGGGGAAAT TCGAAGCGCC TTTGTACGGC
ATGCTCGATG TCGACAAGCT GATCGAATCC CACGACTGGG GCAAACTGCC GAAGCCGGCG
ATCAGCCTGC ACGGCCAGCC GTCCGACGAG TCGAAACCGA CCGTGCTGTG GGACGGCGAG
TGGGAGATCA CCTGGGTGAC GTTCCGCGAC ATGGGCGCGG CGTTCGGCGC CGCAATCCTC
GGCATCTATG TGCTGGTGGT GGCGCAGTTC AAAAGCTTCA AGCTGCCGCT GGTGATCCTG
ACGCCGATCC CGCTGACGCT GATCGGCATC CTGATCGGCC ATTGGTTGCT CGGGGCGCCG
TTCACCGCAA CCTCGATGAT CGGCTTCATC GCGCTCGCCG GCATCATCGT GCGCAACTCG
ATCCTGCTGG TCGATTTCAT CCGCCATTCC GGCGGTGCGG GGAAGACGTT GCGCGAAGTC
GTGCTGGAAG CCGGCGCGGT GCGGTTCAAG CCGATCCTGC TCACCGCGCT GGCGGCGATG
ATCGGTGCGG CAACGATCCT GCTCGACCCG ATCTTCCAGG GTCTTGCGAT CTCGCTGCTG
TTCGGCCTGG CGTCATCGAC GCTGCTCACG GTGCTGGTCA TTCCGGCGAT TTATATCGTG
CTGCGCGACA AACCGCCGAT TCCGCCGCCG GCCACGGCAA AGTGA
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| Protein sequence | MNLGISGRLT KATIQSPLTP LFLLASLIAG LIALAAIPRE EEPQISVPMV DIRINADGLR
APDAVELVTK PLEAIVKGID GVEHVYSQTE DDRVMVTARF LVGTKAEDAI LRVHEKIRAN
IGSIPVGIPE PLIVGRGIND VAVTVLTLSP KPEAAARWTD KDLYELADKL RSELMKVDSI
GLTYISGGGA QQIRVEPDPE KLSLYGVTLQ QLVAKVKDAN RSFLAGSVRD AGTMRSVSAG
QTLMGIPDIG LLLVATRDNR PVYVKDVAQV IIGPNMAEHR VWNDARDDAG KWDRVPAVTL
ALAKRAGANA VVVSHDIKAR LATLQGSLIP KDVAVTITRD YGETANEKAN ELLFHLGLAT
ISIVVLIAIA IGWREAIVTA VVIPTTILLT LFAANLMGYT INRVSLFALI FSIGILVDDA
IVVVENIARH WGMKDGRPRL QATIEAVAEV GNPTVIATLT VVAALLPMLF VSGLMGPYMA
PIPANASAAM LFSFFVAMMV APWLMLKLAP KQGVAGTGHG HHDEGRLGRL YRRFASPIVA
CKRASWIFLL GVGIATLLSM ALFYTKSVTV KLLPFDNKSE IAVVLDLPEG ATLEDTERTL
FAAADIARGL PEITSVQTFA GTPAPFNFNG LVRHYYLRER PELGELQVNL KERGERSRAS
HDIALDLRKR LQALKLPEGT SLKVVEVPPG PPVLSTLLAE IYGPDAATRR AVTAEVEKIF
KQVPFIVDVD NSIGEPRPRL RLSIDQDRLE FFGVEQKDVY DTVQALFGGT SIGYSHRGEG
RNPIAITVGL PKRDLEWNEA LASTPVPANS LPGAKTVVEL GQLVKATKEV GSPMIFRRDG
RFADMVMAEL AGKFEAPLYG MLDVDKLIES HDWGKLPKPA ISLHGQPSDE SKPTVLWDGE
WEITWVTFRD MGAAFGAAIL GIYVLVVAQF KSFKLPLVIL TPIPLTLIGI LIGHWLLGAP
FTATSMIGFI ALAGIIVRNS ILLVDFIRHS GGAGKTLREV VLEAGAVRFK PILLTALAAM
IGAATILLDP IFQGLAISLL FGLASSTLLT VLVIPAIYIV LRDKPPIPPP ATAK
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