Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1195 |
Symbol | |
ID | 6408851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1265675 |
End bp | 1267309 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711093 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001990210 |
Protein GI | 192289605 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTCT GGCCCGAGGC CGGCATCGGT GGCGCGCTGC GCCGCGAGAC TCACTACGAC GGCCGGTCGA TGCTGTGCTT CTCCGAGCGC CCCGCTCATC TCGCAGCCAT GTTCGACGAT CTGGTCGCGC GATTCGGCGA CCGTCCGGCG ATCGTCGACG ACCGCGCGCT CAGCTATCGC GAGCTCGATC TGCTGGTTCG CAAGATCGCG GTGTCGCTGG CCGCACTCGG CATTAGCAAG GGCGACCGCG TCGCACTGTT CCTCGGCAAT TGCTGGGAGT TCCTGGCGGT GACGCTCGCC TGCAACCGGC TCGGCGTCCT GGTAGTCCCG ATCGGCATCC GGCAGCGCCG CGCCGAACTC GAATTCCTGT TGAACAACAG CGGCGCCAAG GTGGTGGTGT TCGAGGCGGA GCTGACTGAC GAGATCCCGG CAGCCGCCGA AGTGCCACAG CTCGCGCATC GCTTCGTCGC GCACGGAACC GCCGAGGGCG CGCGGCCGTT CGAGGATCTG CTCGCCGCCG AGCCGGCGAA CGCGCCGCTC GCAGAGATGC ACGAAGACGA TACCGCGGTG ATCCTCTACA CCTCGGGCAC CACCGGCAAA CCGAAGGGCG CCGAGCTGAC TCATCTCAGC ATCCTGCATT CATCCTACGC GTTCGCGCGC GCCCACGAGC TGACTGAACG CGACCGCGGC CTGGTCGCGG TGCCGCTGTC GCATGTGACA GGCCTCGTCG GCGTATCCTA TGCAACGATC GCGGCCGGCG GCTGCGTTGT GCTGATGCGG CAGGCGTTCA AGACCGCCGA CTTCCTCGCC CTCGCAGCGC GCGAGCGGAT CACCTATTCG ATCCTGGTGC CGGCGATCTA CACACTCGCG GTGATGCATC CGGAGTTCGA CAAGCACGAT CTGTCGGCCT GGCGGATCGG CTGCTTCGGC GGCGCGCCGA TGCCGGTACC GACCATCGAG ATGCTGAGCA AGCGACTGCC GAACCTGCAG CTCCGCAACG CCTACGGCGC GACCGAGACC ACCTCGCCGA CCACGATCAT GCCGCAGGCG TATTGGCGTG ATCACATGGA CAGCGTCGGC CAGGCGATTC CTTACGCGCA TGTCCGCGTG CTCGACGCCG ACGACAACGA GGTCGCACCC GGTGAGCCCG GCGAACTCCT GATCGCCGGC CCGATGGTGG TGCCGCGCTA TTGGCAGCGT CCCGATGCCA ACGCCAAGGA GTTTGTGAAC GGCTACTGGC GCAGCGGCGA CATCGGCTCG ATCGACCAGG ACGGCTTCGT TCGGGTATTC GACCGCAAGA AGGACATGAT CAACCGCGGC GGCTTCAAGA TCTTCTCGGC GGAAGTCGAG AACGTGATCT GCGGCATCGA CGGCGTGCTG GAAACCGCGA TCATCGGCAC GCCCGACCCA GTGCTCGGCG AGCGCGTCAA CGCCATCGTG GTGACAAGCG AAGGCGCCAG CCTCAACGAG CGCGACGTCG CCGCCTACTG CGCGGCACGG ATGTCGGACT ACAAAGTGCC GGAGAGCATC ATCATCCGCT CCGAGCCCCT GCCCCGCAAT GCCAACGGCA AGATTCAGAA AACGGTGCTG CGCGAGACAA TCGCTGACCG GGCGGCGAGT TACGCTCGGT CCTAG
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Protein sequence | MTFWPEAGIG GALRRETHYD GRSMLCFSER PAHLAAMFDD LVARFGDRPA IVDDRALSYR ELDLLVRKIA VSLAALGISK GDRVALFLGN CWEFLAVTLA CNRLGVLVVP IGIRQRRAEL EFLLNNSGAK VVVFEAELTD EIPAAAEVPQ LAHRFVAHGT AEGARPFEDL LAAEPANAPL AEMHEDDTAV ILYTSGTTGK PKGAELTHLS ILHSSYAFAR AHELTERDRG LVAVPLSHVT GLVGVSYATI AAGGCVVLMR QAFKTADFLA LAARERITYS ILVPAIYTLA VMHPEFDKHD LSAWRIGCFG GAPMPVPTIE MLSKRLPNLQ LRNAYGATET TSPTTIMPQA YWRDHMDSVG QAIPYAHVRV LDADDNEVAP GEPGELLIAG PMVVPRYWQR PDANAKEFVN GYWRSGDIGS IDQDGFVRVF DRKKDMINRG GFKIFSAEVE NVICGIDGVL ETAIIGTPDP VLGERVNAIV VTSEGASLNE RDVAAYCAAR MSDYKVPESI IIRSEPLPRN ANGKIQKTVL RETIADRAAS YARS
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