Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1180 |
Symbol | |
ID | 6408836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1251860 |
End bp | 1252624 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711078 |
Product | ABC transporter related |
Protein accession | YP_001990195 |
Protein GI | 192289590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACCT TGCTCGAAGT CCAGCACCTG TCGAAATCGT TCGGCGGCTT GCGCGTCACC GACGACGTCT CGTTCACGCT GTCGAGCGGC GACCGCGTTG CGCTGATCGG GCCGAACGGC GCCGGCAAGA CCACGCTGGT CAATCAGCTC TCCGGAGATC TGGCGCCGTC GGATGGCCGC ATCCTTCTCG CTGGCGAGGA CGTCACCACC GCATCGATCC CCCAGCGCGT CCGCGGAGGT CTGGTGCGCA CCTTTCAGGT GACGCGCCTG TTCACCAGCC TCACGGTGGC CGAGAACGTT GCGCTCGCAG TGATGCAGCG CCGCGGCCTG ACCAAGCGGA TGTTCTCCTC GGTGATCGAC AAGTCAGATG TTCGCGACGA GTGGCAGGGC GTGCTCAGCC TGCTCGGCAT CGGTCATCTG GCGGCCACGC CGGTGACCAA GCTGGCTTAC GGCCAGCAGC GGCTGCTCGA TCTCGCGATC GGTCTCGCCA TGAAGCCGCG GGTGCTGGTG CTGGACGAGC CCGCTGCCGG CGTGCCGCAC GACGAGTCGC CGCGGATCCT CGAGGCGATC GGGCGGATGT CGCCGGAGAT CGCGATCCTG ATGATCGAGC ACGACATGGA TCTGGTGTTC AAATTCGCCA AGCGCGTGCT GGTGCTGGCG AATGGCGCGC TGATCTTCGA AGGCACGCCC GCCGAGGTGA AGGAGAACGA CGCCGTCCGT GCGGCCTATT TGGGAAACTA TGCCGATGCC CGCCGCGCGT CTTGA
|
Protein sequence | MTTLLEVQHL SKSFGGLRVT DDVSFTLSSG DRVALIGPNG AGKTTLVNQL SGDLAPSDGR ILLAGEDVTT ASIPQRVRGG LVRTFQVTRL FTSLTVAENV ALAVMQRRGL TKRMFSSVID KSDVRDEWQG VLSLLGIGHL AATPVTKLAY GQQRLLDLAI GLAMKPRVLV LDEPAAGVPH DESPRILEAI GRMSPEIAIL MIEHDMDLVF KFAKRVLVLA NGALIFEGTP AEVKENDAVR AAYLGNYADA RRAS
|
| |