Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1095 |
Symbol | |
ID | 6408751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1160849 |
End bp | 1161877 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642711001 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001990118 |
Protein GI | 192289513 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCATT ACGTCGGTTT GGATGTCTCG CAAAGAGAAA CTGCGGTGTG TGTGGTCAGC GAGATCGGGC AATTAGTCTT CGAGGGAAAG GCCAAGTCAG ATCCCGGCGC TCTGACCAAC CTGCTTCACA AACATGCTCC GCTTGCGGAG CGCATTGGCT TTGAGACTGG CGCGATGGCA AGCTGGCTTT GGCACGAGCT TCGTAGAGTC GAACTCCCTG TCGTTTGCAT CGATGCGCGA CATGCAAACG CGGCCCTGTC GGTCCGTATG AACAAGAGCG ATCAAAATGA CGCTCGAGGC CTAGCCGAAC TAGTGCGGGT CGGTTGGTAT CGAGAAGTCA AAGTTAAGAG CGAGAAAAGT CAGAAGATCC GCGCGATGCT TGTAGCACGA TCCCGACTCG TATCGATGCG CCGGGACATT GAGAACCAGG TCCGTAGTCT GATCAAAGAA TGTGGATTAC TATTCCCTCG CGCCATCGGC CAACAGTTCC GCAATCGGGT CAGCGAGCTA TTGGGCGAGG ACCATCAGCT TGTCAGCGTG GTCGCGCCGC TGCTGTCGAT TCATGAGCAC ATCTGTCTGC AGCAAGGCAA GTTCGACGAC GAGGTTCGCC GATTGGCGAA GTCGGACGAA ACGACGCGAC GCCTGATGAC GGTTCCTGGC GTCGGAGTAG TGACCGCCCT GACTTTCCGC CATACGATCG ATGACCCATC CCGCTTCCGG TCGGCCTCGA CAGTCGGCGC CTATCTCGGT CTTACACCTC GGCGCAACCA ATCTGGGGAA ACCGACACCA GTGGCAAGAT ATCTCGATGG GGCGATCGGC TGCTCCGAAC GTACCTGTTC GAGGCGGCGA CCGTGCTGCT CTATCGGACT AAGAAATGGT CCTCCCTCAA GGCCTGGGGA GTGAAGCTCG CGAAACGGAT AGGTATGAAG AAGGCGAAAG TCGCCATCGC CCGCAAGATC GCCGTGATTC TTCACTGCAT CTGGGTCGAT GGCACATCGT TCGAGTGGGG TCAGGCAACG CCGGCCTGA
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Protein sequence | MKHYVGLDVS QRETAVCVVS EIGQLVFEGK AKSDPGALTN LLHKHAPLAE RIGFETGAMA SWLWHELRRV ELPVVCIDAR HANAALSVRM NKSDQNDARG LAELVRVGWY REVKVKSEKS QKIRAMLVAR SRLVSMRRDI ENQVRSLIKE CGLLFPRAIG QQFRNRVSEL LGEDHQLVSV VAPLLSIHEH ICLQQGKFDD EVRRLAKSDE TTRRLMTVPG VGVVTALTFR HTIDDPSRFR SASTVGAYLG LTPRRNQSGE TDTSGKISRW GDRLLRTYLF EAATVLLYRT KKWSSLKAWG VKLAKRIGMK KAKVAIARKI AVILHCIWVD GTSFEWGQAT PA
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