Gene Rpal_1087 details

Gene Information

• Locus tag: Rpal_1087
• ID: 6408743
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1153263
• End bp: 1154039
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 642710993
• Product: hypothetical protein
• Protein accession: YP_001990110
• Protein GI: 192289505

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGTTC GGACGTTCAT CTATATGGTG GTCGTGACAC TCGCAGTCGC GGGCGTCGCC 
GCGTTGTCGC TGGGCCTGTA TCGTAACGGG TCTCTGGCTG TTTCGGGATG GACCGACGCG 
GTCCTCCCTG GCCATCTTTC CAGTCGGCAC GGGTTTCTGT CCGAGAGGTG CGAAACCTGT 
CATACGCCGA CCAAGGGTGT AGAGGCAGCG GCTTGCATCG CCTGTCATAC GACAGCGGCT 
ACCGATCTTG GCAAGCAGTC GACGGCGTTT CATGCGACGA GCAAGGAATG TCGTGGGTGT 
CATCTTGAGC ATGCGGGCGG CGTGCGTCCG ACCAAGATGG ACCACTCTGT ACTTATCCAG 
ATCGGAGCGT TTTCCCGAAA CGCCGACACC TCGGCTCGGG CGATTACCGA GAAGATGGTG 
CTCGATCTGA AGAACGTCCT TGGATTTTCC AGGTCCGATG AACGCGAAAA GGCAAGTCTT 
GGTTGCTTTG AATGTCACAG CAATCGAGAA CCGCATCGGG GGCTCTTCGG GCGTGAGTGC 
GCTGACTGCC ACGGAGTGGA CTCCTGGAAG CTCGCGCAGT TCATGCACCC CTCCCCGAGC 
TCCAAGGAAT GCGCACAGTG TCACCAGGCG CCGCCGAGTC ACTACATGGA GCATTTTGTG 
ATGATGGATC AGATGATCAC CGGAAAGGAG AAGGCGGCCG TGAACCAATG CTACCTCTGC 
CATCGGACGG ACTCCTTCAA CGACATCAAG GATGTCGGTT GGTACAAACA TCATTGA 

 

Protein sequence

MSVRTFIYMV VVTLAVAGVA ALSLGLYRNG SLAVSGWTDA VLPGHLSSRH GFLSERCETC 
HTPTKGVEAA ACIACHTTAA TDLGKQSTAF HATSKECRGC HLEHAGGVRP TKMDHSVLIQ 
IGAFSRNADT SARAITEKMV LDLKNVLGFS RSDEREKASL GCFECHSNRE PHRGLFGREC 
ADCHGVDSWK LAQFMHPSPS SKECAQCHQA PPSHYMEHFV MMDQMITGKE KAAVNQCYLC 
HRTDSFNDIK DVGWYKHH