| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1083 |
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| Symbol | |
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| ID | 6408739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1147782 |
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| End bp | 1149566 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642710989 |
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| Product | hypothetical protein |
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| Protein accession | YP_001990106 |
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| Protein GI | 192289501 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTCT TACACTCAAG TCCCGTTGGT TCTCAGGCCG CTCCCGAAGC ACCTACACCC
AATGGCGATG CATGCGGGGC AAACTCCCAG CCCACTCGTG CAGAGGCATC CGATGCCGCG
CCGGACCTGT GGACGTACAG CCGCGACCTC CTCGAACGCT CCATTCTCTT CTGGGATACG
CTCCGGCAAC GCGCCGACGA TCTGATAGAG CACGAAAGAC GCGGGCTGCC GCCTCTCCTT
GATTTTCGGT CCGAGACCAT TCTGGATGCG CGGCAGTTTG CGCATCCCGT CAACTACGTC
CTCTTGCGCA TTTTCGCCGA AGACGCACCG ACCATCACGC CAAGCGACGA GCAGAAATCT
CCCGTCCTCG TGATCGATCC ACGCGCCGGA CACGGGCCGG GAATCGGCGG CTTCAAGAAG
GATTCGGAGG TTGGTATCGC CCTTGCGGAG GGATACCCGG TATACTTTGT CTCGTTTTTC
CCTGAGCCCT GCCGTGGACA GACCCTCGCC GACGTCTTGC ATGCGCTCCG TCACTTCGTT
CAAGCCGTGG CCATCCGTCA CGCTGGCCGC GCGCCCATTC TGTACGGCAA TTGTCAGGCC
GGCTGGGCAG TGACGCTGCT CTCGGCAGAC TGCAGCGGAC TTGTGGGACC CGCGGTGCTG
AACGGATCGC CGCTCTCCTA TTGGTCGGGG GAAGCGGGTG TCAATCCAAT GCGTCTCGCA
GCCGGCTTCA ACGGGGGCGT TTGGCTGGCA CATCTCGTTG CCGATCTCGG CGATGGACGA
TTCGACGGCG CCTGGCTGGC GCAGAACTTC GAGAATCTGA AACCTGAAGC TCAATGGGAA
AAATACGCCA ACCTATTCAC CCACATCGAC CGAGAACGGG AGCGGTTCCT CGACTTCGAG
CGCTGGTGGG GAAGCTTCTT CTTCCTTAGC CGTGAGGAAA TCTTGGCGAT CGTCGAAAAC
CTCTTCATCG GCAATCAGCT CGAAGACGGT CGTTTCCGAA TCTGCGAACA CTGCTTCGCC
GACCTTCGTC GCATCCGCAA TCCGCTCGTG ATCTTTGCCT CCTACGGCGA CAACATTACG
CCGCCGCACC AGGCCCTAGG CTGGATTCCG ATCGTGTATA GGACCACCTC CGAACTGATC
CAGGCCGGAC AGCGGATAGC ATATTTGACC AATCCCCACG TGGGACATTT GGGAATCTTC
GTGTCAGGTG CGGTTGCTCA ACGCGAGCAC CGGGCCATCC TCGCCAGCAT GCCCGAGATC
GAACGGCTCG CGCCCGGCTT ATACGAGATG AAGATTGAAG AAGGAGGCGC TTCGGACAAC
TCGTCAAATC TCCCCTTTGC AGTGCGGTTC GAGCCACGGC AGGTCGAAGA TCTCAACTTC
CCGAAGCCGG ACCCCGCCTT CGAGCGCATA AGAGACTTCT CCGAAACGGC AGAAGCAATC
TACAAGACGT TCTTCAGCCC CTTCGTCCAG GCTACTTCCA ATCCGTTGAC GGCAGAAATG
GCCAAATGGC TTCACCCGAT GCGGGCCCGC CGCTATCTCT TCTCCCCAGC ATTCTTGCCG
TGGCTCCGCG GGCTCCCGCC CCTTGCGAAA TCGATCCGCG ACAATCGTCA GCCTTTGGCC
GAAGACAATC CCTACCTTGG CGGCGAACGA AAATGGATCA GCCTGGTTAC CTCGTCCATC
GAAACGGCCC GGCTCAACCG CGACGCGACT CTGGAGCGCA TGTTCGCGAT AATGTACGGC
TCTGCTCCTC CCAAGAAATC CGACACGTAT CAGAGGACGA CGTGA
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| Protein sequence | MQFLHSSPVG SQAAPEAPTP NGDACGANSQ PTRAEASDAA PDLWTYSRDL LERSILFWDT
LRQRADDLIE HERRGLPPLL DFRSETILDA RQFAHPVNYV LLRIFAEDAP TITPSDEQKS
PVLVIDPRAG HGPGIGGFKK DSEVGIALAE GYPVYFVSFF PEPCRGQTLA DVLHALRHFV
QAVAIRHAGR APILYGNCQA GWAVTLLSAD CSGLVGPAVL NGSPLSYWSG EAGVNPMRLA
AGFNGGVWLA HLVADLGDGR FDGAWLAQNF ENLKPEAQWE KYANLFTHID RERERFLDFE
RWWGSFFFLS REEILAIVEN LFIGNQLEDG RFRICEHCFA DLRRIRNPLV IFASYGDNIT
PPHQALGWIP IVYRTTSELI QAGQRIAYLT NPHVGHLGIF VSGAVAQREH RAILASMPEI
ERLAPGLYEM KIEEGGASDN SSNLPFAVRF EPRQVEDLNF PKPDPAFERI RDFSETAEAI
YKTFFSPFVQ ATSNPLTAEM AKWLHPMRAR RYLFSPAFLP WLRGLPPLAK SIRDNRQPLA
EDNPYLGGER KWISLVTSSI ETARLNRDAT LERMFAIMYG SAPPKKSDTY QRTT
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