| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1044 |
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| Symbol | |
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| ID | 6408700 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1110610 |
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| End bp | 1111556 |
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| Gene Length | 947 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710957 |
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| Product | Transposase and inactivated derivatives-like protein |
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| Protein accession | YP_001990074 |
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| Protein GI | 192289469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3415] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGG CTCTATCGCT TGATTTAAGG ACACGAGTTC TGGCGGCGAT CGCCGGTGGG
CTGTCGTGCC GTCAGGCCGC GGAACAGTTC GGGGTCAGCG CATCGAGTGC CATCCGCTGG
CGAGCCATGC AGCGTCGGCA AGGCGACGCG CGGCCCAAGG CATTGGGGGG TGATCGCCGG
TCAGGTCGCA TCGAAGCGCA TGCCCCGAGC ATTCTGGCGC TGGTCGAGAC CAAACCGGAC
ATCACGCTTC ACGAGATCCA GGCGGCGTTG GCCGAGCAAG GCGTGGCGGT CGGAATCGGG
ACGTTGTGGC GCTTCTTCGC GCGACGACGG ATCACTTTCA AAAAAAGACT GCGCATGCCG
CCGAGCAGAA CCGTCCCGAC GTCGTGATGC GGCGAACGGC TTGGGTTGAG GCGCAACCTG
CATTCGACCC CGCGCACCTG GTGTTCATCG ACGAAACCTG GGCCTCCACC AATATGGCCC
GCAGCCGCGG CCGAGCCCCG AAGGGCCAAC GCCTGCGCGC CGCTATCCCG CATGGACACT
GGAAAACCAC CACCTTCGTC GGCGCCCTAC GCCTCGAAGG CATGACGGCG CCCTTCGTGC
TCGACGGACC GATCAACAAA GACGCTCTCG AAGCTTACGT CGAAAGCATC CTCGTTCCCA
CACTGCGATC CGGCGACATC GTGGTGATGG ACAATCTGTC GAGCCACAAA AGGTCACGCG
TCTCGGCGCT GATCGCCGAA GCCGGCGCGG TGCTGCTCTA TCTGCCGCCC TACAGTCCCG
ACTTCAACCC GATCGAGAAC GCGTTCGCAA AACTGAAGGC TCTGCTGCGC AAGGCCGCCG
AGCGCACCGT CGAGGGCCTC TGGGAAGCAA TCGCCCGATG CCTCGACGCA TTCAAGCCAA
CCGAATGCGC AAACTACTTC GCCGCTGCAG GTTACAAACC AACATGA
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| Protein sequence | MSKALSLDLR TRVLAAIAGG LSCRQAAEQF GVSASSAIRW RAMQRRQGDA RPKALGGDRR
SGRIEAHAPS ILALVETKPD ITLHEIQAAL AEQGVAVGIG TLWRFFARRR ITFKKKTAHA
AEQNRPDVVM RRTAWVEAQP AFDPAHLVFI DETWASTNMA RSRGRAPKGQ RLRAAIPHGH
WKTTTFVGAL RLEGMTAPFV LDGPINKDAL EAYVESILVP TLRSGDIVVM DNLSSHKRSR
VSALIAEAGA VLLYLPPYSP DFNPIENAFA KLKALLRKAA ERTVEGLWEA IARCLDAFKP
TECANYFAAA GYKPT
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