Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1017 |
Symbol | |
ID | 6408672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1080090 |
End bp | 1080500 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642710931 |
Product | protein of unknown function DUF710 |
Protein accession | YP_001990049 |
Protein GI | 192289444 |
COG category | [S] Function unknown |
COG ID | [COG3027] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCGA GCGACTCCGC TGGATCCGCC AACCACGTCA GCGTCACCAT CAACGGCCGG CAATACCGGA TGGCCTGCGA GCCCGGCCAG GAGCCGCAGC TGCTCGGGCT CGCTGAAAAT CTCGAGACAC GGATCCAGAG CCTGCGCGGC CGGTTCGGCG AGATCGGCGA CGCGCGGCTG ACTGTGATGG CGGCGCTGAT GATGGCCGAC GAACTCCTCG ACGCCCACGG CCGCATCGCC TCGCTGCAGC AGGAGGTCGA TGCCCTGCGC AACGACCGCG CCGCTGCGCT CGATCGCACG GTCTCGACCA ACCGCGCCGT CGCCGCTGCA CTCAACAGCG CCGCCGAACG CATCGAACGC ACCACCCAAG TGCTCAACCG CACCATCGGC GGCGGCATCG CGATCGGGTA G
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Protein sequence | MSSSDSAGSA NHVSVTINGR QYRMACEPGQ EPQLLGLAEN LETRIQSLRG RFGEIGDARL TVMAALMMAD ELLDAHGRIA SLQQEVDALR NDRAAALDRT VSTNRAVAAA LNSAAERIER TTQVLNRTIG GGIAIG
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