Gene Rpal_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1017 
Symbol 
ID6408672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1080090 
End bp1080500 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID642710931 
Productprotein of unknown function DUF710 
Protein accessionYP_001990049 
Protein GI192289444 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCGA GCGACTCCGC TGGATCCGCC AACCACGTCA GCGTCACCAT CAACGGCCGG 
CAATACCGGA TGGCCTGCGA GCCCGGCCAG GAGCCGCAGC TGCTCGGGCT CGCTGAAAAT
CTCGAGACAC GGATCCAGAG CCTGCGCGGC CGGTTCGGCG AGATCGGCGA CGCGCGGCTG
ACTGTGATGG CGGCGCTGAT GATGGCCGAC GAACTCCTCG ACGCCCACGG CCGCATCGCC
TCGCTGCAGC AGGAGGTCGA TGCCCTGCGC AACGACCGCG CCGCTGCGCT CGATCGCACG
GTCTCGACCA ACCGCGCCGT CGCCGCTGCA CTCAACAGCG CCGCCGAACG CATCGAACGC
ACCACCCAAG TGCTCAACCG CACCATCGGC GGCGGCATCG CGATCGGGTA G
 
Protein sequence
MSSSDSAGSA NHVSVTINGR QYRMACEPGQ EPQLLGLAEN LETRIQSLRG RFGEIGDARL 
TVMAALMMAD ELLDAHGRIA SLQQEVDALR NDRAAALDRT VSTNRAVAAA LNSAAERIER
TTQVLNRTIG GGIAIG