Gene Rpal_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0972 
Symbol 
ID6408626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1038757 
End bp1039341 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content70% 
IMG OID642710885 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001990004 
Protein GI192289399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0921311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGA CGAAGCGACG CACCAATCCT GAACGGTCCA GCGCGACCCA GGCGGCCCTG 
ATCGCGGCCG CCCGCAAGGC GTTCGTGGCT GGCGGCTATG CGGACACCAG CACGCCGGAT 
CTGGTGGAAG CTGCTGGCGT CACGCGTGGC GCGCTGTATC ACCATTTCGC AGACAAACAG 
GCGCTGTTCC GGGCGGTCAT CGAGGCCGAA TCCGCGGCCG TCGCGGCGGA GGTCGAGGCC 
GGTGCTACGG ACGGCGCGGC AATCGAGGCG CTTCTTTCTG GGGGCGAGGC GTATCTCGCC 
GCGATGGCGG TGCCGGGTCG CACGCGACTG CTGCTGATCG AGGCGCCTGC TGTGCTCGGC 
CGCGCTGAAG CCGACGCGAT CGATGCGCGG CACGGCGTCA GGACGCTGCG GGAGGGCTTG 
AGGGCGGCGA TCGAGCAGAA AGCGATCGCG CCGATTCCGG TCGAGGCGGC CGCGAAGCTG 
CTCGGCGCGG CGTTCGATCG TGCCGCGCTG GAGATCGCGC ACGGCGGCGA TCGCGAGAGT 
TGCCTTGCTG TGCTGCGGGC CCTGATCGAA GGGCTGCGGC GATGA
 
Protein sequence
MKATKRRTNP ERSSATQAAL IAAARKAFVA GGYADTSTPD LVEAAGVTRG ALYHHFADKQ 
ALFRAVIEAE SAAVAAEVEA GATDGAAIEA LLSGGEAYLA AMAVPGRTRL LLIEAPAVLG 
RAEADAIDAR HGVRTLREGL RAAIEQKAIA PIPVEAAAKL LGAAFDRAAL EIAHGGDRES 
CLAVLRALIE GLRR