| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0968 |
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| Symbol | |
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| ID | 6408622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1035230 |
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| End bp | 1036615 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710882 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001990001 |
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| Protein GI | 192289396 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.164156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGAC ACAACCGGCT GGCAGCCGCC GCGCTCGCGG CATGGTTCGG CGGCGTGGCG
CTTTCGGCCA CGGCGGCGCA GGCGCAATCC GGCAATCCTC TGAACTTCCT CGACAGCATT
TTCGGCAATC CGTCGCCGAG CCGCCCGGCT GCAACCGGCG CTGGCGCGCC CTCAGGCGGT
AGCTCCGCCG TGCAGCCATG GAGCGGCGAG GACGGGGCTT CGGGCCATCC GCTGATGACC
GCGGCGGCAA TCCGCGAGGC CGCGGCGAAC TTCGACAATT GCGTCGCCGC GATGTGGCCG
GACGCGGCCC GCCGCGGCAT CTCCCGCGAG TCATTCGAGC GCTACACCGC CGGCCTGTCG
CCCGACCTGC GGCTGATGGA CCTGATGGAT TCGCAGCCGG AGTTCACCAA ATCGATCTGG
GATTATCTCG ACATCCTGGT CAACGACACA CGCCTCGCCA AGGGCCGCGA AATCCTGGCG
CAGTACAAGC CGCAGTTCGA TGCGGTCGAG CGCGCCTACG GCGTCGACCG CTACATCATC
GCATCGATCT GGGGAATCGA ATCGAACTAT TCGACCCAGA TGGGCGATCG CTATGTGGTG
AACTCGACCG CGACGCTGGC TTGCGTCGGC CGCCGCCAGG CGTACTTCAA GGACGAATTC
CTCACCGCGC TGGAGATCCT GCATCGCGGC GACCTGCGTC CCGAGCAGCT GCGCGGCTCA
TGGGCCGGCG CATTCGGGCC GACGCAATTC ATGCCGACCG CGTTCAAGCG CTTCGCGGTC
GACGCCGACG GCGACGGCCG CCGCGACGTC GTCGACAATC CCTACGACCT GATCGCGTCG
ACCGCCAACA ACCTGAAGAA GGACGGCTGG CAGACCGGCC AGACCTGGGG CTACGAGGTC
GTGGTGCCCC GCGGCTTCAA CTACATGCTG GCCGACCGCC GCCAGACCCA GACTCTCGCG
CAGTGGGAGC AGATGGGCCT GCGCCGCGCG GGCGGCCAGC CGTTCCCGCG CTCGAACGAA
AAGGCCTACC TGCTCGCCCC CGCCGGCGCC GCAGGTCCCG GCTTCCTGAT GCTCACCAAT
TTCCGGGTGA TCATGAAGTA CAACCCGGCT GAGGCCTACG CGCTGGCGAT CGGCCATTTC
GCCGACCGGC TGCGCGGCGG CGCCCCGTTC GTCCAGGAGT GGCCGCGCCA GGAGCGCGCC
CTGTCCCGCA CCGAGAAGCT GGAATTGCAA CAGCTCCTCG CCCAGCGCGG CTTCTACCGC
GGCACCCCCG ACGGCCAGTT CGGCTCGGAA ACCCGCAGCG CACTGCGGAA TTTCCAGGCC
TCGATCGGCG CCCCGGCGGA TGGATTTGCG ACCGGGGAAA TGTTGGAGAG GTTGAGAGGT
CGCTGA
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| Protein sequence | MTGHNRLAAA ALAAWFGGVA LSATAAQAQS GNPLNFLDSI FGNPSPSRPA ATGAGAPSGG
SSAVQPWSGE DGASGHPLMT AAAIREAAAN FDNCVAAMWP DAARRGISRE SFERYTAGLS
PDLRLMDLMD SQPEFTKSIW DYLDILVNDT RLAKGREILA QYKPQFDAVE RAYGVDRYII
ASIWGIESNY STQMGDRYVV NSTATLACVG RRQAYFKDEF LTALEILHRG DLRPEQLRGS
WAGAFGPTQF MPTAFKRFAV DADGDGRRDV VDNPYDLIAS TANNLKKDGW QTGQTWGYEV
VVPRGFNYML ADRRQTQTLA QWEQMGLRRA GGQPFPRSNE KAYLLAPAGA AGPGFLMLTN
FRVIMKYNPA EAYALAIGHF ADRLRGGAPF VQEWPRQERA LSRTEKLELQ QLLAQRGFYR
GTPDGQFGSE TRSALRNFQA SIGAPADGFA TGEMLERLRG R
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