Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0957 |
Symbol | |
ID | 6408611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1018280 |
End bp | 1018756 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642710871 |
Product | heat shock protein Hsp20 |
Protein accession | YP_001989990 |
Protein GI | 192289385 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.634441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAGCT TCGATCTCAC CCCGTTCTAT CGTTCGACCA TCGGCTTTGA CCGGCTGTTC AATCTGCTCG ACCAGACCGC TGCGGATGCG GCCGCGCCCG GCTATCCGCC CTACAATATC GAGCGGACCG GCGAGAATGC GTATCGCATC ACCGTTGCGG TCGCCGGGTT CTCTCCGTCC GAGCTGTCGA TCGTCAGCAA GGAGAACACG CTGACCATCA AGGGCGAGAA GACCGCTGAA GAGGCCGCCA AGGCTGAAGT GCTGTATCGC GGCATCGCCG CGCGCGCCTT CGAGCGGGCC TTCCAGCTCG CCGATTACGT CACGGTGAAG AACGCCAGCC TCGAAAACGG TCTGCTGCAC GTCGACCTCG TGCGCGAAAT TCCCGAGGCG AAAAAGCCGC GCAGCATTCC GATCAGCATC AATGCTCAGG CGGGCCCGCA AGTGGTCACC GACAACACCG AGAAGGCGGC CGCGTAA
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Protein sequence | MRSFDLTPFY RSTIGFDRLF NLLDQTAADA AAPGYPPYNI ERTGENAYRI TVAVAGFSPS ELSIVSKENT LTIKGEKTAE EAAKAEVLYR GIAARAFERA FQLADYVTVK NASLENGLLH VDLVREIPEA KKPRSIPISI NAQAGPQVVT DNTEKAAA
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