| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0923 |
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| Symbol | |
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| ID | 6408577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 981723 |
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| End bp | 982787 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710837 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001989956 |
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| Protein GI | 192289351 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.526967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAGA AGACCGACGC GACCGAGACG TCGCACGACG AACTGCGCTA TCTGCAGGAC
TGTCACCCCG GCCCCGACCA GGCGGTCGAG ATCGTGCCGG GCGTGCTGTG GCTGCGGCTG
CGGCTGCCGT TTCGGCTCAA CCACGTGAAC ATCTATCTGC TCGCCGATGG CGACGCCTGG
GCGATGGTCG ACACCGGCTT CGGCAACGAT GCGACCATCG CGGCCTGGGA GACGCTGTTC
GACGGTGCGC TGGCTGGCTT TAGCATCAGC CGGGTGATCG TCACTCATGC CCATCCGGAC
CATGTCGGCA TGGCGGGCTG GATCGTGCAG CGGTTCGGCT GTCCGCTCTA CATGTCGCAG
ATCGAGTATC TGCAAGGCGT GTATCACCAG AACCGTCGCA CCGAAGAACG GCTGGTCAAC
AACCGCGCGT TCTTCCGCCG CCACGGCATC GACGAAGCCG TGATCGACCA ACTCGTCGGC
CGCGGCCAGG ACTATCTGAA AAAGACCGTG CCGCTGCCGG CAGCGTATCG TCGGCTCGCC
AAGGGCAAGG ACATCACTGT CGGCGAGCGA ACGTTCCGGA TCATCACCGG CGCCGGCCAC
TCGCCCGATC AGGTGATGCT GTATTGCGAG GCCGACAAGC TATTCCTTTC CGCCGACCAG
GTGCTGAGCA AGATCTCGCC GAATGTCAGC GTGTGGGCTC ACGAGCCCGA CGAAGACGCC
CTCGGCTCGT ATCTTTCGTC GCTCGCAGAG CTCGACACAT TCCTGCCGGA CGACGTCCTG
GTGCTGCCCG GTCACGGCCT GCCGTTCCAC GGCGTCAAGA CCCGCATCAA GCAGCTGGCC
GATCATCACG AGGAGCGCTG CGGGATGATC GCGGACGCTT GCCGTACCAA ACCGATGAGT
TCGGCCGAAC TGGTACCGGT GGTATTTCAC AAACACGTGC TCGATGCGCA TCAAACCGGC
TTCGCCGTCG GCGAGCTGAT CGCCCACGTG AACTACATGC TGGCGCAGAA CCGTTTGCAG
CTGGCGCCCA CCACGGACGG TGTGATGCGG TTCACCAACG TTTAA
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| Protein sequence | MHKKTDATET SHDELRYLQD CHPGPDQAVE IVPGVLWLRL RLPFRLNHVN IYLLADGDAW
AMVDTGFGND ATIAAWETLF DGALAGFSIS RVIVTHAHPD HVGMAGWIVQ RFGCPLYMSQ
IEYLQGVYHQ NRRTEERLVN NRAFFRRHGI DEAVIDQLVG RGQDYLKKTV PLPAAYRRLA
KGKDITVGER TFRIITGAGH SPDQVMLYCE ADKLFLSADQ VLSKISPNVS VWAHEPDEDA
LGSYLSSLAE LDTFLPDDVL VLPGHGLPFH GVKTRIKQLA DHHEERCGMI ADACRTKPMS
SAELVPVVFH KHVLDAHQTG FAVGELIAHV NYMLAQNRLQ LAPTTDGVMR FTNV
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