Gene Rpal_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0903 
Symbol 
ID6408557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp961603 
End bp962229 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content65% 
IMG OID642710817 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_001989936 
Protein GI192289331 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.169536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGC CGCTTCCGCA AGCTCCGCAG CAGCCGGCAC CACGCCGAGG ACTCGGACAC 
GACACGGCGG TGGCAGCGGT GTGCGGTCTG GTTGTCGCCC TGATGGTCGG GGCGTCGTTC 
GCCGCCGTGC CGTTCTATAA CTGGTTCTGC CGCACCACCG GCTTCAACGG CACCACGCAG 
GTCGCCCACG CTGTGCCGAG TTCGGCGCCG CTCGACCGCA CCGTCACGGT GAGCTTCGAT 
TCCAACGTCA ACGGCCTGCC GTGGAAGTTC GAGCCGGAGC AGCGCGAGAT CGAGGTGCCG 
ATCGGCAAGG TGGTGACGGT GTATTACCGC ATCACCAACC TGTCGCGCTC CGACACCGTC 
GGACAGGCGG CCTATAATGT CACCCCGCTG ACGGTCGGCT CCTACTTCAC CAAAATCAAT 
TGCTTCTGCT TCACCGAGCA GCCCCTGGCC GCCGGTGAGA GCCGCGACAT GCCGGTGGTG 
TTTTACATCG ATCCGGCGTT CGCCGCCGAT TCGGAGAACG ATACCGTCAA GACAATCACC 
TTGTCCTACA CCTACTACCC GGTGCGCGAT CCAGCGCCGA AGCCGGTGGC TTCGAGCGAA 
CCGGCACCGC GCAAGGGCAA TCTCTGA
 
Protein sequence
MSPPLPQAPQ QPAPRRGLGH DTAVAAVCGL VVALMVGASF AAVPFYNWFC RTTGFNGTTQ 
VAHAVPSSAP LDRTVTVSFD SNVNGLPWKF EPEQREIEVP IGKVVTVYYR ITNLSRSDTV 
GQAAYNVTPL TVGSYFTKIN CFCFTEQPLA AGESRDMPVV FYIDPAFAAD SENDTVKTIT 
LSYTYYPVRD PAPKPVASSE PAPRKGNL