| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0873 |
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| Symbol | |
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| ID | 6408527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 926137 |
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| End bp | 927486 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710787 |
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| Product | porin |
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| Protein accession | YP_001989906 |
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| Protein GI | 192289301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0140955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA TTTTCGCCGG CGTCGTGCTG GCTGGCACTG CCGCCGTCAG CGCCCAAGCG
GCCGATCTCG CCGTCAAGGC TCCGTACCTG AAGGCCCCGG TTGCCGCCGT CTATGACTGG
ACGGGCTTCT ACATCGGCGC CAACGTCGGC GTCGGACTCG GCCGCAACCT TCAGACGCAC
GCCTATCCGG GCGGCGCCTC ACTGAACACC ACCTACCTGC AGCCGCAGGG CGTGATCGGT
GGCGGCCAGA TCGGCTACAA CTGGCAGCTC GGCTCGTTCC TCGGCCCGAT GCTGCTCGGC
CTTGAAGCCG ACATCCAGGG CAGCGGTGCC AGCGACGGCT ATACCTCGCT CAACGGCCTC
GCCACCAACT ACAACCAGAA GCTCGACTGG TTCGGCACCG TGCGCGGCCG CGTCGGCCTC
GTGCGCGGCC CGGCGGTCGC CTACTTCACC GGTGGTTATG CGGTCGGCAG CGTCAAGACC
ACCGTTACCG AAGGCGGTCT GGTGGCGTTC GACAACAGCA AGACCCGCTC CGGCTGGGTG
ATCGGCTCGG GTGTGGAAGC TGCGCTGGGC GGCAACTGGA CCGGCAAGAT CGAATATCTG
TATCTCGACC TCGGCAACCA GACCGACTTC TTCGGCAATC AGAGCCTGCG CACCGAAGTG
CGCGAGAGCA TCTTCCGCGC CGGTCTGAAC TACCGCATCG GCGGCAACGG CACCTACATC
ACCCCGCCGC CGGCGAACTG GGCTGGCCTG TACATCGGCG GCAATTTCGG CGGTGCGACC
GGACGTGATC GCTCGAGCCT GACCCTCGGC GGCGGCCAGA CCGACACCTT CAACCTGGCG
CCGGATGGCT TCATCGGCGG CGGCCAGATC GGCTACAACT GGCAGGCCTC GAACTGGGTG
TTCGGTGTCG AAGCCGACTT CCAGGGCTCG ACCCAGAAGG ATCAGCGCGC CTCGGTGCTC
GGCCCGCGGG CCTACTATGA CGCCAAGCTG CCCTGGTTCG GCACTGCGCG TGGCCGCATC
GGCTACTCGC TCGGTTCGAC CCTGTTCTAC GGCACCGCCG GCTACGCCTA CGGCAACATC
AAGTCCGATA TCGTCAGCTC GATCGGCAAC TACAGCTTCA AGACCACCAA GGGTGGTTGG
GCTGCCGGCG CCGGCATCGA GACTCCGTTC CAGCTGTTCG GCCTGCTTGG CCCGAACTGG
ACCTCGAAGA CCGAATATCT CTACGTTGAC CTCGGCTCGA CCACCGACGT GTTCGGCGGC
ACCGGCATCA ACACCACCAA GGTCACCGAA CACATCCTGC GTACCGGCAT CAACTATCAC
TTCAATCAGC CGGTGGTCGC GAAGTACTAA
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| Protein sequence | MKRIFAGVVL AGTAAVSAQA ADLAVKAPYL KAPVAAVYDW TGFYIGANVG VGLGRNLQTH
AYPGGASLNT TYLQPQGVIG GGQIGYNWQL GSFLGPMLLG LEADIQGSGA SDGYTSLNGL
ATNYNQKLDW FGTVRGRVGL VRGPAVAYFT GGYAVGSVKT TVTEGGLVAF DNSKTRSGWV
IGSGVEAALG GNWTGKIEYL YLDLGNQTDF FGNQSLRTEV RESIFRAGLN YRIGGNGTYI
TPPPANWAGL YIGGNFGGAT GRDRSSLTLG GGQTDTFNLA PDGFIGGGQI GYNWQASNWV
FGVEADFQGS TQKDQRASVL GPRAYYDAKL PWFGTARGRI GYSLGSTLFY GTAGYAYGNI
KSDIVSSIGN YSFKTTKGGW AAGAGIETPF QLFGLLGPNW TSKTEYLYVD LGSTTDVFGG
TGINTTKVTE HILRTGINYH FNQPVVAKY
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