Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0814 |
Symbol | |
ID | 6408467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 855316 |
End bp | 856842 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710727 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001989847 |
Protein GI | 192289242 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTTG CTTACTTCGA CTGGATCGCC CATCACGCCG AGGTCCGCCC CGAGCGGATC GCGGTGGTCG ATCTCGCCAC CAGTCGCAAG ATCAGCTACC GCGCAATGGA CGAACGGGTC GACCGGTTGG CTGCCCATCT CGCTGCGCTT GGCGTTGGCC GTGGCGACCG GGTCGCGGTG CTGGCGCTGA ATGCGGTCGA GACGCTGGAG GTGCAGTTCG CCTGCTTCCG GCTCGGCGCG ATCTTCGTGC CGCTTAATGT CCGGCTCACC GTGCACGAAC TATCCTACAT CGTCGGCGAC GCCGCGCCGC GGGTGCTGGC GCATGACGAC GAGCTGGCTC CGATGGCGAC GGAGTTGAAG GCGGCCTGCA GCGTGCCGCA TCTGTTGGCG TTCGGCCCGG CCTACGAGGC GGCGCTGGCG GCCTCGCCGC TGCTCGGAGC CTCCGAGCCT GTGACGCTCG ATGACGTCTC CACCATCATG TACACCTCCG GCACCACCGG AAAGCCGAAG GGCGCCATGA TCACCCATGG AATGACCTTC ATCAACGCGG TCAATCTCGG CATTCCGGCG TTCATTTCGC AACGCACGGT GTTTCTCTGC GTGCTGCCGC TGTTCCACAC CGGCGGGCTC AATTGCTACA CCAATCCGGT GCTGCACGCC GGCGGCACCA CATTGTTGAT GCGCGCGTTC GATCCGGGCG CAGCGCTGTC GATTATCGGT GATCCGTCGG TCGGGCTGAC GCATTTCTTC GGGGTCCCCT CGATCTATCA GTTCATGTGC CAGCATGCGG CGTTCGCGGC GACCGATCTG TTGCGGCTGC AGATCGCCGG GGTCGGCGGC GCTCCGATGC CGGTACCCCT CTTGAAGATC TGGCAGGAGC GTGGCTGCGC CTTGGTCCAA GGCTACGGCA TGACCGAGAC CAGCCCGGCG GTGCTGATGC TCGATGCCGA CGATGCCGCG CGCAAGGCCG GCTCGGCCGG CAAACCGGTG CTGCACGCCG ATCTCAAGAT CGTCGGCCCA GACGGCGCGC CGGTGAAACC GGGCGAGATG GGCGAACTCT GGGTGAAGGG CCCGAACATC ACCCCCGGCT ATTGGAACAG GCCGGACGCC AATCGCACCT CGTTCACCGA CGGCTGGCTG CACACCGGCG ACGCGGCGCG GGTCGACGAC GAAGGCTTCT ATTACATCGT CGACCGCACC AAGGACATGT ACATCTCGGG CGGCGAGAAC GTATACCCGG CCGAGGTCGA GGACGTGCTG TACCAATTGC CGGAGATTGC CGAAGCGGCA GTGATCGGCG CGCCTGATCC GCAATGGGGC GAAACCGGCG TCGCGGTGGT CGCGCTCAAA CCCGGCCAGG AACTGAGCGA GGCGAAGCTG CTGGCGCACT GCCGCGAGCG GCTGGCGCGG TTCAAATGTC CGCAGCGCGT CAGCTTCGTC GAAGCGCTGC CGCGCAACGC CACCGGCAAG GTGCACAAGC CGACGCTGCG CGAACGCATT CTGGTGCGGG AGACCGCCGA CGCGTGA
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Protein sequence | MSFAYFDWIA HHAEVRPERI AVVDLATSRK ISYRAMDERV DRLAAHLAAL GVGRGDRVAV LALNAVETLE VQFACFRLGA IFVPLNVRLT VHELSYIVGD AAPRVLAHDD ELAPMATELK AACSVPHLLA FGPAYEAALA ASPLLGASEP VTLDDVSTIM YTSGTTGKPK GAMITHGMTF INAVNLGIPA FISQRTVFLC VLPLFHTGGL NCYTNPVLHA GGTTLLMRAF DPGAALSIIG DPSVGLTHFF GVPSIYQFMC QHAAFAATDL LRLQIAGVGG APMPVPLLKI WQERGCALVQ GYGMTETSPA VLMLDADDAA RKAGSAGKPV LHADLKIVGP DGAPVKPGEM GELWVKGPNI TPGYWNRPDA NRTSFTDGWL HTGDAARVDD EGFYYIVDRT KDMYISGGEN VYPAEVEDVL YQLPEIAEAA VIGAPDPQWG ETGVAVVALK PGQELSEAKL LAHCRERLAR FKCPQRVSFV EALPRNATGK VHKPTLRERI LVRETADA
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