Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0746 |
Symbol | |
ID | 6408399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 787130 |
End bp | 789163 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710661 |
Product | Radical SAM domain protein |
Protein accession | YP_001989781 |
Protein GI | 192289176 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCT CTATTGATAC TGCCCCGCCG CTGATGTCCC GGTTCCGCCC CAGTGCGGCC CCGCGCAAGC CCGCGCCGTT CCTGCCGATG AGCCGGGCCG AGATGGATAA GCTCGGCTGG GATGCGTGCG ACATCGTCTT GGTGACCGGC GACGCTTACG TCGACCATCC GAGCTTCGGC ATGGCGATCA TCGGCCGCCT CCTTGAATCC CAGGGTTTCC GCGTCGGCAT CATCTCGCAA CCGGATTGGC AGTCCGCCGA ACCGTTTAAG GTGCTTGGCA AGCCGCGGGT GTTCTTCGGC GTCACCGGCG GCAACATGGA CTCGATGGTC AACCGCTACA CGGCGGACCG CAGGCTGCGC CATGACGACG CCTACACGCC GAACGGCGAA GGCGGCAAAC GGCCGGACCG CTGCACGCTG GTCTATGCGC AGCGCTGCCG CGAAGCGTTC AAAGACGTGC CGATCATTCT CGGCGGCATC GAGGCCTCGC TGCGCCGGAT CGCGCATTAC GATTACTGGT CCGACAAAGT TCGTCGCTCG GTGCTGGCGG ACGCCAAGGC CGATCTGTTG CTGTACGGCA ATGCCGAGCG CGCGGTTATC GAAGTCGCAC ATCGTTTGGC TGCGGGTGAG GCGCCACGCG AACTTGAGGA TATCCGCGGT GTCGCGCTGT TCCGTCGCGT GCCTGAGAAC ACGATCGAGC TGCACGCCGA CGATCTCGAC GCCGCCGACG AAGGCGCGCG CCAGGTGCGT GGCGACGTCG TCATCCGGCT GCCGAGCTGT GAGCAGGTCG AGCAGGACAA GGAAGCCTAT GCCCGCGCCT CGCGCGTGCT GCACCGCGAA AGCAACCCCG GTAACGCGCG GCCCTTAGTG CAGCGTCACG GCGACCGCGA CCTGTGGCTC AATCCGCCGC CGATTCCGCT GACGACTGAA GAAATGGACT CGGTCTACGA TCTGCCCTAC GCCCGCGCCC CGCATCCGTC CTACGGCAAT GCCAAGATCC CGGCGTGGGA CATGATCAAG ACCTCGGTGA CGATCATGCG CGGCTGCTTC GGCGGCTGTA CCTTCTGCTC GATCACCGAG CACGAAGGCC GCATCATCCA GAGCCGGTCG GAAGCCTCGA TCCTGCAAGA GATCGAGAAG ATTCGCGACA AGACGCCAGG CTTCACCGGC GTGATCTCGG ATATCGGCGG GCCTACCGCG AATATGTACC GGATGGCCTG CAAGGACCCG AATATCGAGT CGTCCTGCCG CAAGCCATCC TGCGTGTTTC CGGACATTTG CCCCAACCTC AACACCTCGC ACGATGACCT GATCCGGCTG TACCGCAAAG TGCGCGAGGT GAAGGGCATC AAGAGGGTGA TGGTGGCATC GGGCGTGCGC TACGACCTCG CCGTCAAGAG CCCCGCCTAC ATCAAAGAAC TGGTGAGCCA TCACGTCGGC GGCTACTTGA AGATCGCGCC GGAGCACACC GAGCGCGGCC CGCTCGACAA GATGATGAAG CCGGGCATCG GCACCTATCA TCGCTTCAAG CAAATGTTCG AGGCCGCCGC CAAACAGGCC GGCAAACAGT ACTATCTGAT CCCGTATTTC ATCGCGGCTC ATCCGGGAAC GACGGACGAG GATATGATGA ACCTCGCGTT GTGGCTGAAG CGCAATCGCT ACCGCGCCGA CCAGGTGCAG ACCTTCCTGC CCTCGCCGAT GGCGACCGCG ACTGCGATGT ATCACAGCGG CGTCAACCCG CTGCGCGGGG TGCGCCACGG CGCCAGCGAG CCGGTCGAGG CAATCAAGGG ACTGCGGCAG CGCCGGCTAC ACAAGGCGTT CCTGCGCTAT CACGATCCGG ACAACTGGCC GGTGCTGCGC GAGGCATTGA AGGCAATGGG CCGTGCCGAC CTGATCGGCT CGCGGCCTGA CCAGCTGGTC CCGGCGCATC AGCCGCCTGG GACCGGCAAA GCCGCCGGCA CCCGCCGCCC GGTGCGCGGC GACGGACCGA AGCCGCAGCG TTTCACCACC AAGGGCGTGC GGCTGGTCAA GTAA
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Protein sequence | MQTSIDTAPP LMSRFRPSAA PRKPAPFLPM SRAEMDKLGW DACDIVLVTG DAYVDHPSFG MAIIGRLLES QGFRVGIISQ PDWQSAEPFK VLGKPRVFFG VTGGNMDSMV NRYTADRRLR HDDAYTPNGE GGKRPDRCTL VYAQRCREAF KDVPIILGGI EASLRRIAHY DYWSDKVRRS VLADAKADLL LYGNAERAVI EVAHRLAAGE APRELEDIRG VALFRRVPEN TIELHADDLD AADEGARQVR GDVVIRLPSC EQVEQDKEAY ARASRVLHRE SNPGNARPLV QRHGDRDLWL NPPPIPLTTE EMDSVYDLPY ARAPHPSYGN AKIPAWDMIK TSVTIMRGCF GGCTFCSITE HEGRIIQSRS EASILQEIEK IRDKTPGFTG VISDIGGPTA NMYRMACKDP NIESSCRKPS CVFPDICPNL NTSHDDLIRL YRKVREVKGI KRVMVASGVR YDLAVKSPAY IKELVSHHVG GYLKIAPEHT ERGPLDKMMK PGIGTYHRFK QMFEAAAKQA GKQYYLIPYF IAAHPGTTDE DMMNLALWLK RNRYRADQVQ TFLPSPMATA TAMYHSGVNP LRGVRHGASE PVEAIKGLRQ RRLHKAFLRY HDPDNWPVLR EALKAMGRAD LIGSRPDQLV PAHQPPGTGK AAGTRRPVRG DGPKPQRFTT KGVRLVK
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