Gene Rpal_0711 details

Gene Information

• Locus tag: Rpal_0711
• ID: 6408364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 746559
• End bp: 747227
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642710626
• Product: flagellar hook capping protein
• Protein accession: YP_001989746
• Protein GI: 192289141
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACGA TTTCCAGCGC CGTATCGACG GCCGCCACCA CGACCAGCAC AGCGAGTTCG 
ACCAGTTCGG CGTCTTCGTC GCTGAGCTCG AGCGATTTTC TCAGCCTGCT GATCAGCGAA 
CTGCAAAACC AGGACCCGCT GAACGCGACC AGCACGACCG ACTTCATCAA TCAGCTCACC 
TCCTATGCGA ATTTCAGCCA GCAGCAGGAG ATCAACTCCA GCATGACTTC GCTGGCGAAT 
TCGTTCTCCA GCCTGGTGAC GCTGAACTCC GTCAACTACA TCGGCCACAC CGTCGAGGCG 
AAGACCGACA CGGCGACACT GACGGGCGGC TCGGCGACCT TCGGTTACAC GCTGTCGGCG 
GCGGCCTCCG ATGTGTCGAT CAGCATCAAG GACTCCTCCG GCAACACCGT GTGGAGCGGC 
ACGGGCTCGG GCAACGCGGG CTCCAACAGT CTCACCTGGG ACGGCAAGAA TTCGAGCGGC 
ACCCAGCTCG CGGACGGTGG TCAGTACACC ATCTCGGTGA GCGCGACCGA TTCCGCCGGC 
AACTCCGTCT ACAAATATTC GACCGTCAGC GGCACCGTGA CCGGTATCGA CACCTCGTCG 
AGCACGCCGG CCCTGCTCGT CAACGGCGTG TCGGTCAGCG CCAGTAACAT CATCGGCGTT 
TCGTCCTGA 

 

Protein sequence

MTTISSAVST AATTTSTASS TSSASSSLSS SDFLSLLISE LQNQDPLNAT STTDFINQLT 
SYANFSQQQE INSSMTSLAN SFSSLVTLNS VNYIGHTVEA KTDTATLTGG SATFGYTLSA 
AASDVSISIK DSSGNTVWSG TGSGNAGSNS LTWDGKNSSG TQLADGGQYT ISVSATDSAG 
NSVYKYSTVS GTVTGIDTSS STPALLVNGV SVSASNIIGV SS