| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0686 |
|---|
| Symbol | |
|---|
| ID | 6408339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 721826 |
|---|
| End bp | 723085 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710601 |
|---|
| Product | phage tail protein I |
|---|
| Protein accession | YP_001989721 |
|---|
| Protein GI | 192289116 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4385] Bacteriophage P2-related tail formation protein |
|---|
| TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG ATTTCACCCC GATCCAGCCG ACGCTCAACG ATGCCGAGCG CTGCCACAGC
CTGGTCAACG CCGCGCGCTG GCCGGTGCTG TTCGCCGAGG CCGCCAAGCT GCGCACGCTG
TGGGACCCGT GGGCATGCCC GGTCGATCAG TTGCCGCTGC TCGCGTGGGC ATGGTCGGTC
GACTTCTGGA AGGCTGAATG GCCGGAGCAC CGCAAGCGGC AAGTGATCGC CGAGTCGCGC
GCTTATCACG AAGCTAAGAC CACGGTGCTC GGCTATCGGA TGGCTCTTGG CTACGTCGAT
GCCGAGTTCG TTCGGGCCCG GCTGCCGCGA CACGCGTTCT TCGCCGGTGC TGCGCCGACC
CAGGAGTCGC ATGATCGCTG GCTCGCTGGC CTGCCGGAGA TCCGCATCTA CACGGCGGTG
TTTCCGATCA AGCGCCGGCC AGTGCGGTTC TTGCAGGCCG ACGGAACGAT CGTTCAACGC
ACCCTTAAAG GGCGCTTTGT CGGCCGGCGC TTCCGGGCGC ATTCGGCGAA GTCGATCGTG
CTCGACGGTC GGCGGCCCGA ATTGCGGCGG CCCGATGGAT CGGTGCAGCG CCTCGTGTTC
GAAGGCGTGC GGATCGACAG CTTTGGACGG CTGCTGAGCG ATCCGGAGCG CCTGGTCATT
CCGGCGCCGC TGCGCAACAC CTTCCAGGTC GGAAAGCGGC TCCGCGGTCG GTTCGTCGGC
GACGGCAAGG CGAACGGCAA GCGCGTTATA TCGCTGAGTT TCTCGACGGG CGTCGATGTA
TTCCGGCCGA ATGCCGTGTC GCCGGGCCTC ACGGCGATCG ACGTCGTGCC GCGGCAGATG
TGGGACGTGA TGCCGCCCGG CCGCGGCTGG TTCATCAGCC GGGCTCGTAA GGGCCGCGGC
ATCCAGCGGA ACAGGGCGGA CGAGCTGGCC TATCTGTCGA TCCGGCTCGC TGACGGCAGT
CGTCCGGAGT ACGGCGGGCG CATGCGCAAC CGCATCGGCC GCACGCGGAT CAGGCGCGCA
CCGTTCACCG CGACAGTGCT GGCGCATCTT GCAGGACCGC CCAAGCACGG CTTTCCGGTT
GGTCGCTTCG TCAAGGTCGG CCCGGAAGCG CGCATTGCCG AAGCAATCAA AGCGCTGGCG
GTCACACAGG CGGCTCGCGA CACCGTCTAT CTCGACATCA ATTCGGTCCG TCCGATCACC
TACGGCGATC TTGCTCGATT GCCGGAGAAC GTTCGCGCCG GTGCCATCAT CCGCATCTGA
|
|---|
| Protein sequence | MTADFTPIQP TLNDAERCHS LVNAARWPVL FAEAAKLRTL WDPWACPVDQ LPLLAWAWSV
DFWKAEWPEH RKRQVIAESR AYHEAKTTVL GYRMALGYVD AEFVRARLPR HAFFAGAAPT
QESHDRWLAG LPEIRIYTAV FPIKRRPVRF LQADGTIVQR TLKGRFVGRR FRAHSAKSIV
LDGRRPELRR PDGSVQRLVF EGVRIDSFGR LLSDPERLVI PAPLRNTFQV GKRLRGRFVG
DGKANGKRVI SLSFSTGVDV FRPNAVSPGL TAIDVVPRQM WDVMPPGRGW FISRARKGRG
IQRNRADELA YLSIRLADGS RPEYGGRMRN RIGRTRIRRA PFTATVLAHL AGPPKHGFPV
GRFVKVGPEA RIAEAIKALA VTQAARDTVY LDINSVRPIT YGDLARLPEN VRAGAIIRI
|
|---|
| |