Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0606 |
Symbol | |
ID | 6408256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 659119 |
End bp | 660018 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642710519 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_001989641 |
Protein GI | 192289036 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.229766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACCG TCGCTTCGCT CTGGATCCCC TTTACGCTCG TCGCTGCGCT CGGCCAGGTC GCGCGCAACG CGATGCAGCG CTCGCTGACC GGGCCGCTCG GCACCTGGGG CGCCACCAAC ATCCGCTTCC TGTTCGGCTT CCCGTTCTCG CTGCTGTTCT TCGCCGGCGT GATCGTGGCA ACCGGAGATA CCGTGAGCTG GCCGGGCCTC GAATTCTGGC CGTGGCTGCT GCTCGGCGCG CTGTCGCAGA TCGCCGCCAC CGGGATGATG CTGGCAGCGA TGAACGAACG CTCGTTCGTG GTCACCACCG CATATCTGAA GACCGAGGCG ATCCAGACCG CGATCTTCGG CTTCGTGTTC CTCGGCGATC ACCTGAACCT GTGGAAGGTG GTGGCGATCC TGATCGCGAC CGTCGGCGTC GTCGTCACGG CGCTGCGCCC GGGCGCCGCC CGCGGCCTCG TCAGCCTGCG GCCGACGCTG CTCGGGCTGG GCGCCGCAGC AGCCTTTGCA CTGTCGGCGG TCGGGTTTCG CGGCGCGATC ATCGTGGTCC CGGATGTCAC CTTCGTCACC GCCGCGACCT TCACGCTGGT GTTCGCGCTC GGGGTGCAGA CGCTGGTGCT GACGATCTAC CTGCTGGCGC GGGCGCCGCA GGTGCTGCGC GACATCCTGA GGCTGTGGCG ACCGTCGATG CTGGCCGGCT TCATCGGGGC GGCGGCATCG CAGTTCTGGT TCCTGGCGTT TGCGCTCACC GCCGCCGCCA ATGTCCGCAC CCTGGCGCTG ATCGAGGTGC TGTTCGCGCA GGCCGTGGCA TACTACTCGT TCAAGCAGCC GGTGGCGCCG CGCGAGGTTA TCGGCATTCT CCTGATCGTG CTCGGCGTCG CGCTGCTGGT CGCGGTGTGA
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Protein sequence | MFTVASLWIP FTLVAALGQV ARNAMQRSLT GPLGTWGATN IRFLFGFPFS LLFFAGVIVA TGDTVSWPGL EFWPWLLLGA LSQIAATGMM LAAMNERSFV VTTAYLKTEA IQTAIFGFVF LGDHLNLWKV VAILIATVGV VVTALRPGAA RGLVSLRPTL LGLGAAAAFA LSAVGFRGAI IVVPDVTFVT AATFTLVFAL GVQTLVLTIY LLARAPQVLR DILRLWRPSM LAGFIGAAAS QFWFLAFALT AAANVRTLAL IEVLFAQAVA YYSFKQPVAP REVIGILLIV LGVALLVAV
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