Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0594 |
Symbol | |
ID | 6408244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 648096 |
End bp | 650897 |
Gene Length | 2802 bp |
Protein Length | 933 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710507 |
Product | PII uridylyl-transferase |
Protein accession | YP_001989629 |
Protein GI | 192289024 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAG TCGTGTCACC TCCCCGCCCC GCCCCCGACG ATCGCTTCGA CAGCGCCCGC GTCGCCGCCG AAATCGCAAC GCTGGCCGAA AAACACACCG GCAACGACGC GGCGTTCCGC ACCGCGCTGG CGATGCTGAT GAAGGCGGAG CTGGCCAAAG CCCGCACCGA GGCCGAAGCG CAGTTGCTGC GCGACCGCCA CGGCCGGCGC TGCGCCGAGC GGCTGTGCTA CGTCCAGGAC GCGATCATCC GGCTGCTGTT CAACGCCGCA ACTGAATACC TCTACAACAC CCCGACGCCC TCGAGCTCGG AACGGATGAC GGTGGTGGCG ACCGGCGGCT ACGGCCGCGG CCTGATGGCG CCGGAGAGCG ACATCGACCT GCTGTTCATC CTGCCCTACA AGCAGACCGC CTGGGGCGAG CAGGTCGCCG AAGTCATCCT GTACTGCCTG TGGGACATCG GGCTGAAAGT CGGCCATGCC ACCCGCTCGG TCGACGAGTG CATCCGCCAG GCGCGCGCCG ACATGACGAT CCGCACCGCG ATCCTGGAGA CGCGGTTTCT GGCCGGCGAC GAGGCGCTGT ACGCCGAGCT GGTGGAGCGT TTCGACAAGG AGGTGGTCGA GGGCACCGCG GCCGAATTCG TCGCCGCCAA GCTCGCCGAG CGCGAGGAGC GCCACCGCCG CTCCGGCCAG TCACGCTATC TGGTCGAGCC CAACGTCAAG GACGGCAAGG GTGGCCTGCG CGACCTGCAC ACGCTGTTCT GGATCGCCAA ATACGTCTAC CGGGTTCGCG AAGCCAGCGA GCTGTCCGAG CGCGGCGTGT TCGATCCGGC CGAATTCCGC ACGTTCCGCC GCTGCGAAGA CTTCCTGTGG TCGGTCCGCT GCAACATTCA CTTCGTGACC AAGCGCGCCG AAGACCGGCT GTCGTTCGAT CTGCAGCGCG AGATCGGCGT GCGGCTCGGC TACACCTCGC ATCCGGGAAT GCAGGACGTC GAGCGCTTCA TGAAGCACTA CTTCCTGATC GCCAAGGAAG TCGGCAACCT CACCGCGATC CTGTGCGCCA AGCTGGAGGA TCAGCAGGCC AAGGCGGCGC CGGCGCTGAC CCGAATGATG GCGCGGCTGC GGCCCGCCGC CAAGCGCCGC CGGGTGCCGG AGAGCGACGA TTTCGTCATC GACAATAACC GCATCAATCT GGCAGTGCCG GACGTGTTCA AGCACGATCC GGTCAATCTG ATCCGGATAT TCCGGCTGGC GCAGAAGAAC AATCTCGCCT TCCACCCGGA CGCGATGCGC AGCGTGACGC GGTCGCTGTC GCTGATTACG CCGCAGCTTC GCGACAATCC CGAAGCCAAC CGGCTGTTCG TCGAGATCCT GACTTCCGAC AACGCCGAGC CGGTGCTGCG GCGGATGAAC GAGACCGGCG TGCTCGGCCG CTTCATCCGC GCCTTCGGTC GCATCGTGTC GATGATGCAG TTCAACATGT ATCACAGCTA CACGGTGGAC GAGCATTTGA TCCGCTGCGT CGGCAATCTG CAGGAGATCG AACGCGGCGG GAACGATGAG TTCGCGCTGT CGTCGGAGCT GATCCGGAAG ATCAGGCCCG ATCACCGTGC GGTGCTGTAT GCCGCGGTGC TGCTGCACGA TATCGCCAAG GGCCAGCCCG AGGATCACTC CACCGCCGGC GCCAAGGTGG CGCGGCGGCT GTGCCCGCGC TTCGGCTTCA GCACCGCCGA CACCGAGCTG GTGGCGTGGC TGATCGAGAA GCATCTGGTG ATGTCCACGG TGGCGCAGTC GCGCGACCTG TCGGACCGCA AGACCATCGA GAATTTCGCC GCGGTGGTCG AGACCGTCGA GCAGATGAAG ATGCTCACCA TCCTGACCAC CGCCGACATC CGCGGCGTCG GTCCGGGGGT GTGGAACGGC TGGAAGGCGC AGTTGATCCG GACCTTGTAC TACGAGACCG AGCCGGTGCT GACCGGCGGC TTCTCGGAAG TGAACCGCGC CGAGCGCATC CGCGCCGCGC AAGCCGAATT CCGCGCCGCC TTCACCGAAT GGCCGGAGGC CGACCTCAAT GCCTATGTGG CGCGGCACTA TCCGGCGTAC TGGCTGAAGG TCGATCTGCA GCGCAAGATC CGCCATGCCC GCTTCCTGCG CGCCTCCGAA CAGGCCGGCC ATAAGCTGGC GATCAATGTC GGCTTCGACG AAGCCCGCGC CGTCACCGAA CTCACCATCC TGGCGGTCGA CCATCCGTGG TTGCTGTCGG TGATCGCGGG CGCTTGTGCC AGCGCCGGCG CCAACATCGT CGACGCCCAG ATCTACACCA CGACCGACGG CCGCGCGCTC GACACTATCT CGATCAGCCG CGAATACGAC CGCGACGAGG ACGAGGGGCG CCGCGCCACC CGCATCGGCG AGACCATCGA AGAGGTACTC GAAGGCAAGC TGCGGCTACC CGAGGCGGTC GCACGCCGCG CGAGCAGCGG CAGCAAGGCC AAGCTGCGCG CCTTCGTGGT CGAGCCCGAG GTCGAGATCA ACAACAACTG GTCCGACCGC TATACGGTGA TCGAAGTCAG CGGCCTCGAT CGCCCGGGCC TGCTGTACCA GCTCACCACG GCGATCTCGA AACTCAACCT CAACATCGCC TCGGCGCATG TCGCGACCTT CGGCGAACGT GCCCGCGACG TGTTCTACGT GACCGATTTG TTAGGTGCGC AGATCACCGC TCCGACCCGC CAGGCGGCGA TCAAGCGGGC GCTGGTGCAC CTGCTGGCCA ACGGCGACGC CGCCGAAAAG CCGGCGGCTT GA
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Protein sequence | MDKVVSPPRP APDDRFDSAR VAAEIATLAE KHTGNDAAFR TALAMLMKAE LAKARTEAEA QLLRDRHGRR CAERLCYVQD AIIRLLFNAA TEYLYNTPTP SSSERMTVVA TGGYGRGLMA PESDIDLLFI LPYKQTAWGE QVAEVILYCL WDIGLKVGHA TRSVDECIRQ ARADMTIRTA ILETRFLAGD EALYAELVER FDKEVVEGTA AEFVAAKLAE REERHRRSGQ SRYLVEPNVK DGKGGLRDLH TLFWIAKYVY RVREASELSE RGVFDPAEFR TFRRCEDFLW SVRCNIHFVT KRAEDRLSFD LQREIGVRLG YTSHPGMQDV ERFMKHYFLI AKEVGNLTAI LCAKLEDQQA KAAPALTRMM ARLRPAAKRR RVPESDDFVI DNNRINLAVP DVFKHDPVNL IRIFRLAQKN NLAFHPDAMR SVTRSLSLIT PQLRDNPEAN RLFVEILTSD NAEPVLRRMN ETGVLGRFIR AFGRIVSMMQ FNMYHSYTVD EHLIRCVGNL QEIERGGNDE FALSSELIRK IRPDHRAVLY AAVLLHDIAK GQPEDHSTAG AKVARRLCPR FGFSTADTEL VAWLIEKHLV MSTVAQSRDL SDRKTIENFA AVVETVEQMK MLTILTTADI RGVGPGVWNG WKAQLIRTLY YETEPVLTGG FSEVNRAERI RAAQAEFRAA FTEWPEADLN AYVARHYPAY WLKVDLQRKI RHARFLRASE QAGHKLAINV GFDEARAVTE LTILAVDHPW LLSVIAGACA SAGANIVDAQ IYTTTDGRAL DTISISREYD RDEDEGRRAT RIGETIEEVL EGKLRLPEAV ARRASSGSKA KLRAFVVEPE VEINNNWSDR YTVIEVSGLD RPGLLYQLTT AISKLNLNIA SAHVATFGER ARDVFYVTDL LGAQITAPTR QAAIKRALVH LLANGDAAEK PAA
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