Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0549 |
Symbol | |
ID | 6408199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 599594 |
End bp | 600748 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710462 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_001989584 |
Protein GI | 192288979 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0941477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGCAT CCGAAAACAA GTTCTTCATT CTTCTGCTGG TGGTCGCCAC CGGTCTGTTC GGTTGGATCC TGTGGCCGCT GTACAGCGCG GTGCTGTGGG GCATGGTGAT CGCGATTCTG TTCGCGCCGC TGAACCGGGG CCTCAACCGC GCCTTCGGCT TCCGGCGCAA CCTTGCGGCT CTGATGTCGG TGACGATCAT CGTGCTGATG GTGCTGCTGC CGATGTCGCT GCTCGGTGCA GCGTTGGCCA GGGAAGCGGC CGGCATGTAC ACCAAGATCG AGTCCGGCAA CCTCGATCTG CTGAAAACCA TGCGGGAGCT GTTGGCGGCC CGGCCGGATT GGCTCGGCGA TCTGCTCAGC CGCTTCGGCG TCGGCAATCT CGCGGACATC CAGCAACGGC TGTCGGCTGC GCTGTTGCGC GGCAGCCAGT ATCTGGCCGG GCAGGCGCTC GATATCGGGC AGAGCACCTT CGACTTCACC GTCAATCTGT TCGTGATGGT GTATCTGCTG TTCTTCCTGC TGCGCGACGG AGATCTTCTG GCGGCGCGGA TCCGGCGTGC GACGCCGCTC GGCGTCGATC ATCAGACCCG TTTGCTGGAC AAGTTCACCG TGGTGATCCG CGCCACCGTG AAGGGCAACA TGCTGATCGC CCTGATCCAG GGCGCGCTCG GCGGGCTCGC CTTCTACGTG CTCGGCATCA GTGGCGCGCT GATGTGGGCG GTGGTGATGG CGTTTCTGTC GCTGCTGCCA GCGGTCGGCG CCGGCATCGT CTGGCTGCCG ATGGCGCTGT ATCTGATCGC GTCCGGCTCG GTCTGGCATG GCGTCGGGTT GATTGTGTGG GGCATGCTGG TGATCGGCAT GGTCGACAAT TTCCTGCGCC CGATCCTGGT CGGCAAGGAC ACACGGATGC CGGATTACGT CGTGCTGATC TCCACCCTCG GCGGGCTGGA AGTGTTCGGC CTGAACGGCT TCGTCATCGG CCCGGTGATC GCCGCGATGT TCATCGCCAC CTGGGACATC TATTCTATCG CGCGCGAGGA TGCGGGCGAC ACGCCCCGGA TCGGCGCCGG CACCGGGCCG GCCGCGGTCG CGCCCTCCGA GCCCAGCGGA CCCGTGCCGG TCCGCAGCGA TAGCGGGACG ACGCCTGTCG CCTAG
|
Protein sequence | MPASENKFFI LLLVVATGLF GWILWPLYSA VLWGMVIAIL FAPLNRGLNR AFGFRRNLAA LMSVTIIVLM VLLPMSLLGA ALAREAAGMY TKIESGNLDL LKTMRELLAA RPDWLGDLLS RFGVGNLADI QQRLSAALLR GSQYLAGQAL DIGQSTFDFT VNLFVMVYLL FFLLRDGDLL AARIRRATPL GVDHQTRLLD KFTVVIRATV KGNMLIALIQ GALGGLAFYV LGISGALMWA VVMAFLSLLP AVGAGIVWLP MALYLIASGS VWHGVGLIVW GMLVIGMVDN FLRPILVGKD TRMPDYVVLI STLGGLEVFG LNGFVIGPVI AAMFIATWDI YSIAREDAGD TPRIGAGTGP AAVAPSEPSG PVPVRSDSGT TPVA
|
| |