Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0524 |
Symbol | |
ID | 6408173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 573263 |
End bp | 573949 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710436 |
Product | protein of unknown function DUF1345 |
Protein accession | YP_001989559 |
Protein GI | 192288954 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAGC ACCCGGACGA CGATCCGCTG CTGCTTCGCT TTCGGAAGCT GCCGCGGATC GTTCGCCTGG TGTATTCGCG GCCGCGGCTG TTCGCGTCGA TCGCGATCGG CGTGGTCGCA TTCGCACTGC TACCGGGCTG GCTTCGACCG GTGACGCGCG CGCTGATCGG CTGGGACGTC TCGATCATCG TGTATCTGGC GCTGGCCTAC ACGATGATGG CACGCTGCGG CGTCGCCTAC ATCCGGCGCA ATGCGGTGCT GCAGGACGAC GGCCGTTTCC TGATTCTGAT GGTCACCGCG ATCGGCGCCT ACGCCACCAT CGCGGCGATC GTCACCGAAC TCGGCACCGC CCATCGCGGC GCCGCCGAGC TGGCGCTCGC CACCTTCACC ATCGCGCTGT CCTGGGCGGC CGTGCACACC ACCTTCGCGC TCCACTACGC GCACGAATAT TATCGCGGCG ACCGCGAGGG CGGGCTGGCG TTTCCGGGCA GCGACGAGCA CACCGAGCCC GACTATTGGG ACTTCGTGTA TTTCTCGTTC GTGATCGGGA TGACCGCGCA GGTGTCGGAT GTCGGCATCA CCGACCGGAC GATCCGCCGC ACTGCGACCG CGCACGGCGT CGTATCGTTC GTGTTCAACA CCGCCTTGGT GGCGCTAATG GTCAACATCG CGGCGAGCGC GATCTGA
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Protein sequence | MTEHPDDDPL LLRFRKLPRI VRLVYSRPRL FASIAIGVVA FALLPGWLRP VTRALIGWDV SIIVYLALAY TMMARCGVAY IRRNAVLQDD GRFLILMVTA IGAYATIAAI VTELGTAHRG AAELALATFT IALSWAAVHT TFALHYAHEY YRGDREGGLA FPGSDEHTEP DYWDFVYFSF VIGMTAQVSD VGITDRTIRR TATAHGVVSF VFNTALVALM VNIAASAI
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