| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0511 |
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| Symbol | |
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| ID | 6408160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 554193 |
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| End bp | 557033 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710423 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001989546 |
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| Protein GI | 192288941 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCG CGCTCGCCCG CAAACTCTTC GGCTCCGCTA ACGACCGCAG GGTCAAGGGC
TACCAGACGC GGGTCGCCGC GATCAATGCG CTCGAACCGG AAGTGGCCGC GCTGTCCGAC
GAGGCGCTAC GCGCCCGTAC CGCTGAATTC CGCGCCGAGC TCGCCGCCGG CAAGACCCTC
GACGATTTGC TGGTGCCGGC CTTCGCGACC GTTCGTGAAG CCGCCAAGCG CACCCTCGGC
CAGCGACACT TCGACGTGCA GCTGATCGGC GGCATGGTGC TGCACGAAGG CGACATCGCC
GAGATGAAGA CCGGCGAAGG TAAGACCCTG GTCGCGACGC TCGCCGTGTA CCTCAACGCA
CTCGCCGGCA AAGGCGTCCA CGTCGTCACC GTCAACGACT ACCTGGCAAA GCGCGACTCC
GGCTGGATGG GCCAGATCTA CGGCTTCCTC GGCATGACCA CCGGCGTGAT CGTGCACGGG
CTCGACGACG CCCAGCGCCA GGCGGCCTAC GCCTGCGACA TCACTTACGG CACCAACAAC
GAATACGGCT TCGACTATCT GCGCGACAAT ATGAAATACC GGCTGGAGGA CATGGTCCAG
CGCGGGCACA ATTTCGCGAT CGTCGACGAA GTCGACTCGA TCCTGATCGA CGAAGCCCGT
ACCCCGCTGA TCATCTCCGG TCCGCTGGAC GACCGTTCGG ACTTCTACAA CACGATCGAC
ACCTTCATTC CGCGTCTCGA CAAGTCGGAC TACGACGTCG ACGAGAAGCA GCGCACCGTG
ACGCTGACCG AAGCCGGCAT GGAAAAGATC GAGACGCTGC TGCGCGACGC CGGCCAGCTG
CGCGGCGAGT CGCTGTACGA CGTCGAAAAC GTCTCGGTGG TGCACCACGT CAATCAGGCG
CTGCGCGCCC ACGCGCTGTT CCAGCGCGAC AAGGACTACA TCGTCCGCAA CGACGAGGTG
GTGATCATCG ACGAGTTCAC CGGCCGCATG ATGCAGGGCC GGCGCTATTC GGAAGGCCTG
CACCAGGCGC TGGAAGCCAA GGAACACGTC ACCGTCCAGC CGGAAAACCA GACGCTGGCG
TCGATCACCT TCCAGAACTA CTTCCGGATG TACGACAAGC TCGCCGGCAT GACCGGCACG
GCGTCTACCG AAGCCGACGA GTTCTTCGAC ATCTACAAGC TCGAAGTGGT CGAGATTCCG
ACCAACCTGC CGATTGCCCG TCTCGACGAA GACGACGAGG TGTATCGCAC CCAGCAGGAG
AAGTACGCCG CGATCCTCGC CGAGGTCGAG CGTGCCAACA AGCGGATGCA GCCGGTGCTG
GTCGGCACCG CTTCGATCGA AAAGTCCGAG GTGCTGGCCG AGTATCTAAA GAAGAACGGC
TACAAGCAGA TCGACTTCAC CGACCCGAAG GGAATGGACA AGCTGTACGC CGCCGCCCGC
GCCGGCAAGC CGGCGAAGCT GTTCGCGGTG CTCAACGCGC GCTTCCATGA GCAGGAAGCC
TACATCGTCG CCGAAGCCGG CGTGCCGGGC GCGATCACCA TCGCCACCAA CATGGCGGGC
CGCGGCACCG ACATTAAGCT CGGTGGCTCG CTGGAGATGC GGATTCAGCA GGAAGCCGCG
CACATCACCG ACGAGGCCGA GCGGGCGGCG AAGATCACCG AGATCAAGGC CGACATCGAG
CGCTTCCGCG ACATCGTGCT GAAGGCCGAG GACGAGATCG AGATCGAGCC CGCCAAGGGT
AATAAGCCGG CCAAGACCGC GAAGCGTCCC GGCGGCCTGT ACATCATCGG CTCCGAACGC
CACGAGAGCC GGCGTATCGA CAACCAGCTG CGTGGCCGTT CCGGCCGTCA GGGCGACCCG
GGGCGCTCCA AGTTCTTCCT GTCGCTGGAA GACGACCTGA TGCGGATCTT CGGCTCCGAT
AAGCTCGACA CCATGCTGAC CCGCCTCGGC CTGAAGGAAG GCGAGGCGAT CATCCATCCT
TGGATCAACA AGGCGCTGGA AAAGGCGCAG CAGAAGGTCG AGGCGCGCAA CTTCGACATC
CGCAAGAACC TGCTGAAATT CGACGACGTT CAGAACGACC AGCGCAAGGT GATCTTCGAT
CAGCGCATCG AGCTGATGAA GGAAGACAGC GTGGCCGAAA CGGTCACCGA CATGCGCCAC
ACCTACATCG AAGACCTGGT GGCCAAGTAC GTGCCCGAGC ACGCTTATGC GGAGCAGTGG
GACGTCGCGG GGCTGAAGGC CGAGGTCGAG CGCGTGGTCG GCCTCGACAT TCCGGTCGAC
GAATGGGCCA AGGAAGAAGG TATCGCCGAC GAGGAGCTGA TCACGCGACT GGAGCGGGTG
TTCGACGAAC ACATGGCCGC CAAGGTCGGC CAGTGGGGCT CGGACGTGAT GCGCTACGCC
GAGAAGAGCA TCCTGCTGCA GACCCTCGAC CATCTGTGGC GCGAGCATCT GGTGATGCTC
GATCACCTGC GTCAGGTGAT CGGCCTGCGC GGCTACGGCC AGCGCGATCC GCTGCAGGAG
TACAAGTCCG AAGCCTTCAA TCTCTTCCAG GAAATGAGCT CGCATCTGCG CGAGGCGGTG
ACGGCGCAGC TGATGCGAGT CGAGATCATT CCGCCGGATC AGCCGCAGGA ACTGCCGCCG
ATGGAGGTCC ACAAGATGGA CCCCGACACC GGACAGGACG AGATGGCGCT CGCCAATGTC
ACGCTGGCGC CGGCACAGAC CACCGACAAG GCGGACCGCG ATCCGAACAA GCCCGAGACC
TGGGGCAAGG TCGGCCGCAA CGAAGACTGC CCGTGCGGAA GCGGCAAGAA GTACAAGCAC
TGCCACGGCC GCTACGCTTA A
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| Protein sequence | MIGALARKLF GSANDRRVKG YQTRVAAINA LEPEVAALSD EALRARTAEF RAELAAGKTL
DDLLVPAFAT VREAAKRTLG QRHFDVQLIG GMVLHEGDIA EMKTGEGKTL VATLAVYLNA
LAGKGVHVVT VNDYLAKRDS GWMGQIYGFL GMTTGVIVHG LDDAQRQAAY ACDITYGTNN
EYGFDYLRDN MKYRLEDMVQ RGHNFAIVDE VDSILIDEAR TPLIISGPLD DRSDFYNTID
TFIPRLDKSD YDVDEKQRTV TLTEAGMEKI ETLLRDAGQL RGESLYDVEN VSVVHHVNQA
LRAHALFQRD KDYIVRNDEV VIIDEFTGRM MQGRRYSEGL HQALEAKEHV TVQPENQTLA
SITFQNYFRM YDKLAGMTGT ASTEADEFFD IYKLEVVEIP TNLPIARLDE DDEVYRTQQE
KYAAILAEVE RANKRMQPVL VGTASIEKSE VLAEYLKKNG YKQIDFTDPK GMDKLYAAAR
AGKPAKLFAV LNARFHEQEA YIVAEAGVPG AITIATNMAG RGTDIKLGGS LEMRIQQEAA
HITDEAERAA KITEIKADIE RFRDIVLKAE DEIEIEPAKG NKPAKTAKRP GGLYIIGSER
HESRRIDNQL RGRSGRQGDP GRSKFFLSLE DDLMRIFGSD KLDTMLTRLG LKEGEAIIHP
WINKALEKAQ QKVEARNFDI RKNLLKFDDV QNDQRKVIFD QRIELMKEDS VAETVTDMRH
TYIEDLVAKY VPEHAYAEQW DVAGLKAEVE RVVGLDIPVD EWAKEEGIAD EELITRLERV
FDEHMAAKVG QWGSDVMRYA EKSILLQTLD HLWREHLVML DHLRQVIGLR GYGQRDPLQE
YKSEAFNLFQ EMSSHLREAV TAQLMRVEII PPDQPQELPP MEVHKMDPDT GQDEMALANV
TLAPAQTTDK ADRDPNKPET WGKVGRNEDC PCGSGKKYKH CHGRYA
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