| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0468 |
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| Symbol | |
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| ID | 6408116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 504677 |
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| End bp | 505663 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710380 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001989504 |
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| Protein GI | 192288899 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.792178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGGG AAACGGGCGC GTCGAAGCCG ATCGATCTCT TGATCTATGG CCCGCGCAAG
GAGGTTATCG ATCAGGGTTT CCCGGCCGGC TATGTGCTGC ACAAATGTGA GCGCGCCGAC
GACCTCGAGA AGCTGAGCGA CGAAGCTCGC GGCCGTATCC GCGGTATCGC GGTCACCGGC
CTGGTGCCGA CCGGTGCAGC AATGCTGGCG CGGTTTCCGA AACTCGAAAT CGTGGCGAGC
TTCGGCGTCG GCTACGACCA TGTCGATTCC GCCTGGGCGG CGCAGCATGG CATCATCGTC
ACCAATACCC CCGACGTGCT GACCGAAGAA GTCGCCGATA CCGCGCTCGG GCTGCTGATC
GCGACGTTGC GCGAGTTCAT TCGTGCCGAC AAATACGTCC GCGCCGGACA ATGGCAGACC
CAGGACTATC CGCTCAGCAC CGGGTCGCTG CGCGACCGCA AGGTCGGTAT GGTCGGCATG
GGCCGGATCG GCCAGGCGAT TGCCCGCCGG CTCGACGCCG CACTGGTGCC GGTGGTGTAT
CACTCGCGCA ATCCGGCGCC CGGCGTCGCC TACAAGCACT ATCCGAACCT GATCGAGATG
GCCAAGGAGG TCGACACCCT GGTGGTGATC ACCCCGGGCG GCCCCACCAC CGCCAAGCTG
ATCAACGCCG AGGTGCTCGA TGCGCTCGGG CCGCGCGGCG TGGTGATCAA CGTCGCGCGC
GGCTCGGTGA TCGACGAAGC GGCCCTGATT GAGGCCCTGA AATCCGGCAA GATTCTCGCT
GCCGGCCTCG ACGTATTCGC GGCCGAACCG ACCGTGCCCG AAGAGCTGCG CGCGATGGAC
AATGTCGTGT TGCTGCCGCA TATCGGCTCG GCCTCGGTGG TGACGCGCAA CGCGATGAAC
CAGCTCGTGG TCGACAATCT GAAAGCCTGG TTCTCCGGCC GTCCGCCGCT GACGCCGGTG
GCCGAAACTC CGGTGAAAGG CCGCTGA
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| Protein sequence | MPGETGASKP IDLLIYGPRK EVIDQGFPAG YVLHKCERAD DLEKLSDEAR GRIRGIAVTG
LVPTGAAMLA RFPKLEIVAS FGVGYDHVDS AWAAQHGIIV TNTPDVLTEE VADTALGLLI
ATLREFIRAD KYVRAGQWQT QDYPLSTGSL RDRKVGMVGM GRIGQAIARR LDAALVPVVY
HSRNPAPGVA YKHYPNLIEM AKEVDTLVVI TPGGPTTAKL INAEVLDALG PRGVVINVAR
GSVIDEAALI EALKSGKILA AGLDVFAAEP TVPEELRAMD NVVLLPHIGS ASVVTRNAMN
QLVVDNLKAW FSGRPPLTPV AETPVKGR
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