Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0406 |
Symbol | |
ID | 6408053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 435666 |
End bp | 436286 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710317 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001989442 |
Protein GI | 192288837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0181245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC AACAAGAACC AGCGGACGAC GCGCGCCGCG CCGCGATCCT GCAGGCGGCC TTCGATGTTT TCGTCGAAAA GGGGTTCGAG GCGGCGACCA CCGCCGAGAT CGTCCGCCGG GCCCGGACCT CAAAGCGGAC GCTGTACGAG TTCTTCGCCA GCAAGCAGGA GATCCTGACG GCGCTGATCC GCTATGGCGC TGCCAAGATG CAGCCATCGC CGGAGCTCCC CGAGCCACAA AACCGGCAGC AGTTTCTCGT CGTGCTGGAG CAGTTCGGCC GGATCTTCCT TAGCGAGCTC CTGCATCCCG AGCGGACCGC GATGTATCGG CTCGCGATCG CCGAGGCGGC GCGCGGCGGT GGTTCGGTCG CACGAGAGCT GGAAGCCAGC GGTCGGGTGC CGGTGACGCA AGCCGCGACC CGGTTCTTCG AGCAGGCTGC TGCTCGCGGC ATCATTCGCC GCGAGCAGGT CGCGACGCTG ATCAGCGTGT TCTTTTCGGT GCTGATCGGC ATCACGCCGC TGCAGGTGCT GCTCGGTGAG CCGCCGATCG GCGCGGATGC GATTGCGCAG CGGGCAGCGC TGGCGACGCA GGTGCTGGCG CGGATGATCG AGCCGGCCTG A
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Protein sequence | MEKQQEPADD ARRAAILQAA FDVFVEKGFE AATTAEIVRR ARTSKRTLYE FFASKQEILT ALIRYGAAKM QPSPELPEPQ NRQQFLVVLE QFGRIFLSEL LHPERTAMYR LAIAEAARGG GSVARELEAS GRVPVTQAAT RFFEQAAARG IIRREQVATL ISVFFSVLIG ITPLQVLLGE PPIGADAIAQ RAALATQVLA RMIEPA
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