| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0405 |
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| Symbol | |
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| ID | 6408052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 433392 |
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| End bp | 435527 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710316 |
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| Product | amine oxidase |
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| Protein accession | YP_001989441 |
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| Protein GI | 192288836 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0201487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCT TCCTGACGGT GAAGCTGGTC CTGGTTCCGT TTGCGGTGTT CTGGGCACTG
CTGGCGCTCC ACCAACCCTC CTGGGCGATC TGGCTCGGCC TCGGGTTGTC GCTGGCGGGC
AATGCCTGGC GGGCGTATCG CCGCGAATTG TTCGTGCTCG AAGCCGGCGG GCTGGTGCTA
TTCGCAGCTC TCGCAGCGCT CTCACTGATC GCGCCTGCTG TCGCCGCCAG CAACGCGCTG
TGGCTGTCAT TCGCGGGGCT GGCCGGGATC AGCGCGCTCA GCCTGGCGGC AAAGCGGCCC
TGGACTTCAG ACTATTCGCG CGCCGCCCAT CCGGACAACG CCGACACCCC GCAGTTCTTC
CTGGTCAATG CTGCAATCAC CGCTCTCTGG GCGGTGCTGT TCGGCGCGAT TGCCGCCTGC
CGCTATATCG ACGCGCCGGG CGAGGTCATC ACCGCCATCG TCAGCGTCGG CGCGCTGATC
TCGATCTTCG GACCGAAGGC GGCCATTCAC CTGATCCTGA ACCGAATGGC GGCGTCGCGG
GAAAGCTATC GCTGGCCGAC GCCGTCGTTC GCGCCGTTCG AGGTGCAGGA CTGCGACGTG
GTGATCATTG GCGCCGGCAT TGGCGGCCTC ACCGCCGCGG CGCTGCTCGC CGACGCCGGA
CTGCGCGTGA AAGTCTTCGA GCAGCACGTC GTCGCCGGCG GCTATTGCCA TACTTATTTG
CGCAAGGCGC ATCATCGCGG CCGGCCGGTG CTGTACCGCT TCGACGCCGG ACCGCACGAC
TTCTCCGGCG TGCAGCCGGG CGGGCCGTTC GCGACGCTGC TGCAGCGGCT CGGCGTTGGG
AATCGCATCA CCTGGGAGCG GGTGACGCAC AGCTTCCACA CCCAGGCGGG CGCGATCGAC
GTGCCGCCGG ACTGGCGCGA CTACGTCCGG CTGCTTGGTG AGCGGTTTCC GGCCAGCGCC
GCCGGCATCA AAGAACTGTT CGACGAGATC AAAGCGATCT TCGACGACAT GTTCGCGACC
GCTGCCAGCC GCGGCGGCGT GCCCGGGATG CCGTCGAGCA TCGATGAGCT GCTCGCGTTT
CCGCGCAATC ACCCGCACGC CTATCGCTGG ATGAACCGGC CGTTCGCCGA ACTGGTAGCC
GCCCACGTCC AGGATCCCGC GGCAGTCGCC TTCATCAACG GCCTCGCCGG CTATATCGGT
GACGGCAGCG AGCCGTCGAC CTGCGCCCGG ATGGTGCCGA TCTTCGGCTA TTACTTCCAC
GGCGGCTACT ATCCGCGCGG CGGCTCAAGC GTTGTCTCGG GCGCGCTGGT CGCGGCGATC
GAGGCGCGCG GCGGCGAGGT GAAGCTCAAG ACGCCGGTGG CGCGCATCCT CGTTGAGAAC
GAAGCGGCCG CCGGCGTGGT GCTCGGCAAT GGGGCGACGG TGCGGGCCCG CGCGGTGATC
TCCAATGCCG ACCTGAAGCA CACGCTGCTC GACCTCGTCC CATCCGAGGC GCTGCCGCAG
GATGCCCGGC GCTGGATCAC CGAGGCGGCG CCGGCGAACT CGTGCTTCAG TGTCCACCTC
GGCCTCGACT GCGTGCCGGA CATCCGCCCG TCGGTGCATC TGCACGCGCC GATGCGGGTC
GGGCTGGCGA TGATGTCGAA GCTCGACCCA ACCGCCGCAC CAGCGGGGCA CTCGATCCTG
TCGCTGATTC ATCTGGTGCC ACACGCGGAG GCGAAAAGCT GGTTTCCGCC GGAGCCCGAA
CACGACTGGA AATCCTGGCG GCGTTCGGAG GCGTATCTGC GCCGCAAGCA GGAGCTCGGC
GACCGCATGA TCGCGGCGGC CGAAACCGTG ATCCCGAACC TGTCGCAGCA CATCGTGTAC
CGTACCGATG CGAGCCCGGT GACCTACGCG CGCTACGATT GGGCCAGCTT CGGTTCGATC
TACGGCATGT CGACCGCCGG GCAGCTCAAA GGCTCGAAGT CGCCGCTGCG CAATCTGGTC
ATCGCGGGCG GCGGCAATAT CGGCGCCGGG ATCGAGGCCG TGGTGATATC AGGCGCCGAG
GCTGTCGAAG CGCTGATGCC AGGCCTGCTG GCGAGCGCGC AACCGGTCGC AAGCGAGCCC
GCCGCGGCTA CGAGGCCGGA GTTGATGCCG GCGTAA
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| Protein sequence | MKTFLTVKLV LVPFAVFWAL LALHQPSWAI WLGLGLSLAG NAWRAYRREL FVLEAGGLVL
FAALAALSLI APAVAASNAL WLSFAGLAGI SALSLAAKRP WTSDYSRAAH PDNADTPQFF
LVNAAITALW AVLFGAIAAC RYIDAPGEVI TAIVSVGALI SIFGPKAAIH LILNRMAASR
ESYRWPTPSF APFEVQDCDV VIIGAGIGGL TAAALLADAG LRVKVFEQHV VAGGYCHTYL
RKAHHRGRPV LYRFDAGPHD FSGVQPGGPF ATLLQRLGVG NRITWERVTH SFHTQAGAID
VPPDWRDYVR LLGERFPASA AGIKELFDEI KAIFDDMFAT AASRGGVPGM PSSIDELLAF
PRNHPHAYRW MNRPFAELVA AHVQDPAAVA FINGLAGYIG DGSEPSTCAR MVPIFGYYFH
GGYYPRGGSS VVSGALVAAI EARGGEVKLK TPVARILVEN EAAAGVVLGN GATVRARAVI
SNADLKHTLL DLVPSEALPQ DARRWITEAA PANSCFSVHL GLDCVPDIRP SVHLHAPMRV
GLAMMSKLDP TAAPAGHSIL SLIHLVPHAE AKSWFPPEPE HDWKSWRRSE AYLRRKQELG
DRMIAAAETV IPNLSQHIVY RTDASPVTYA RYDWASFGSI YGMSTAGQLK GSKSPLRNLV
IAGGGNIGAG IEAVVISGAE AVEALMPGLL ASAQPVASEP AAATRPELMP A
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