Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0377 |
Symbol | |
ID | 6408024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 401728 |
End bp | 402165 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642710288 |
Product | thioredoxin |
Protein accession | YP_001989413 |
Protein GI | 192288808 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.655114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGACC ATCTCGTGGT GTGCACGCAT TGCGGCGGGG TCAATCGGCT GCCGGAGCAG CGGCCGGCGC TGGACGGCAA ATGCGGCAAG TGCGGTCATA GACTGTTCGA AGGCCATCCG GCCGACGTCA GCGGCGATCA GTTCGACAAG CAGGTGTCGC GCAGCAGCGT GCCGGTGCTG GTCGATGTCT GGGCGCCATG GTGTGGGCCA TGCCGGGCAA TGGCGCCGGC CTACGAGCAG GCAGCGCGTG AGCTGGAGCC GAATGTCCGC CTGATCAAGC TCAACTCCGA CAACGAACAG CAGGTCGCCG GCCGGCTCGG CATCCAGGGC ATCCCGACCA TGATCCTGTT CGACAACGGG CGCGAGCGCG CCCGGACCTC GGGCGCGATG CCGGCGGGAG AGATCGTGCG CTGGGTGAGA CAGCACCTGC CGGCGTGA
|
Protein sequence | MSDHLVVCTH CGGVNRLPEQ RPALDGKCGK CGHRLFEGHP ADVSGDQFDK QVSRSSVPVL VDVWAPWCGP CRAMAPAYEQ AARELEPNVR LIKLNSDNEQ QVAGRLGIQG IPTMILFDNG RERARTSGAM PAGEIVRWVR QHLPA
|
| |