Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0357 |
Symbol | |
ID | 6408003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 378456 |
End bp | 378788 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710267 |
Product | Phosphotransferase system, phosphocarrier protein HPr |
Protein accession | YP_001989393 |
Protein GI | 192288788 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG ACGCGCCTCA GCCCGGTTCC GGACCGGACC AAGCCTCCGG CGCTTCCGGC GATAAGATTT CCCGTGAGAT TCCCGTCATC AATAAGCGCG GCCTGCATGC GCGGGCTTCG GCCAAGTTTG TGCAGATGGC TGAGCGCTTC AATGCCGAGG TCTGGGTCAC CCGCAACGGC GAGACGGTCG GCGGTACCTC GATCATGGGC CTGATGATGC TGGCCGCCGG AATTGGCACC ACCGTGACCG TCTCGGCGAG CGGCCCCGAA GCGCGCCAGG CGCTGGATGC AATCACCGAG CTGATGGGCT CGAAGTTCGG CGAAGAAGAA TAG
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Protein sequence | MTIDAPQPGS GPDQASGASG DKISREIPVI NKRGLHARAS AKFVQMAERF NAEVWVTRNG ETVGGTSIMG LMMLAAGIGT TVTVSASGPE ARQALDAITE LMGSKFGEEE
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