Gene Rpal_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0357 
Symbol 
ID6408003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp378456 
End bp378788 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content64% 
IMG OID642710267 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001989393 
Protein GI192288788 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCG ACGCGCCTCA GCCCGGTTCC GGACCGGACC AAGCCTCCGG CGCTTCCGGC 
GATAAGATTT CCCGTGAGAT TCCCGTCATC AATAAGCGCG GCCTGCATGC GCGGGCTTCG
GCCAAGTTTG TGCAGATGGC TGAGCGCTTC AATGCCGAGG TCTGGGTCAC CCGCAACGGC
GAGACGGTCG GCGGTACCTC GATCATGGGC CTGATGATGC TGGCCGCCGG AATTGGCACC
ACCGTGACCG TCTCGGCGAG CGGCCCCGAA GCGCGCCAGG CGCTGGATGC AATCACCGAG
CTGATGGGCT CGAAGTTCGG CGAAGAAGAA TAG
 
Protein sequence
MTIDAPQPGS GPDQASGASG DKISREIPVI NKRGLHARAS AKFVQMAERF NAEVWVTRNG 
ETVGGTSIMG LMMLAAGIGT TVTVSASGPE ARQALDAITE LMGSKFGEEE