Gene Rpal_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0341 
Symbol 
ID6407987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp359903 
End bp360211 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content62% 
IMG OID642710251 
Productprotein of unknown function DUF1330 
Protein accessionYP_001989377 
Protein GI192288772 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00521106 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGG GCTATTGGGT GGGGCGGATC GACGTGCATG ATCTCGACGG CTACAAGCGC 
GACTACGTCG CCCACAACGG CGCGGTATTC GCCAAATACG GCGCCAAGTT TCTGACCCGC
GGCGGCACTT ACGAGGCCAA AGAGGGACAG GCGCGATCGC GTAACGTGGT GATCGAGTTC
AAGGACTACG AGACTGCGCT AGCCTGCTAC CATTCGCCGG AGTATCAGGC GCTGATCAAG
GCGCGGGCGC CGTTCTCCGA AGGTGAAATG GTGGTCGTCG AGGGTTACGA CGGTCCGCAG
CCGTCCTGA
 
Protein sequence
MPKGYWVGRI DVHDLDGYKR DYVAHNGAVF AKYGAKFLTR GGTYEAKEGQ ARSRNVVIEF 
KDYETALACY HSPEYQALIK ARAPFSEGEM VVVEGYDGPQ PS