Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0336 |
Symbol | dnaK |
ID | 6407982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 354525 |
End bp | 356420 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710246 |
Product | molecular chaperone DnaK |
Protein accession | YP_001989372 |
Protein GI | 192288767 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0107713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGG TCATTGGTAT CGACCTCGGC ACCACGAATT CGTGCGTCGC CGTAATGGAT GGTAAGTCTG CCAAAGTCAT CGAGAACGCC GAGGGTATGC GCACGACCCC GTCGATCGTC GCGATCACCG ACGACGGTGA GCGTCTGGTC GGCCAGCCGG CGAAGCGTCA GGCTGTCACC AATCCCGAGC GCACCTTCTT CGCAGTCAAG CGCCTGATCG GCCGCCGCTA CGACGACCCG ATGGTCGAGA AGGACAAGGG TCTCGTCCCC TACAAGATCG TCAAGGCTTC CAACGGCGAC GCGTGGGTCG AAGCCGACGG CAAGACCTAT TCGCCCTCGC AGGTCTCGGC CTTCATTCTG CAGAAGATGA AGGAGACCGC GGAAGCGCAT CTCGGCCAGA AGGTCGATCA GGCCGTCATC ACCGTTCCGG CGTACTTCAA CGACGCCCAG CGCCAGGCCA CCAAGGACGC CGGCAAGATC GCCGGTCTCG AGGTCCTGCG CATCATCAAT GAGCCGACCG CGGCCGCGCT GGCCTACGGT CTCGATAAGG CCAAGACCGG CACCATCGCG GTGTACGACC TCGGCGGCGG CACCTTCGAC GTCTCGATCC TGGAGATCGG CGACGGCGTG TTCGAGGTGA AGTCGACCAA CGGCGACACC TTCCTCGGCG GTGAAGACTT CGACATGCGT CTGGTCAACT ACCTCGCCGA CGAATTCCAG AAGGAGCAGG GCATCGACCT GCGCAAGGAC AAGCTTGCGC TGCAGCGCCT GAAGGAAGCC GCCGAAAAGG CCAAGATCGA GCTGTCGTCG ACGACGCAGA CCGAGATCAA CCTGCCGTTC ATCACCGCGG ACCAGTCCGG TCCGAAGCAT CTGACCATGA AGCTGACCCG CGCCAAGTTC GAAGCGTTGG TCGACGACCT GGTGCAGAAG ACCATCGAGC CGTGCCGCAA GGCCCTGAAG GATGCCGGCC TCACCGCCGG TGAGATCAGC GAAGTGGTGC TGGTCGGCGG CATGACCCGC ATGCCGAAGG TCCAGGAAGT GGTGAAGCAG CTGTTCGGCA AGGAGCCGCA CAAGGGCGTC AACCCGGACG AAGTCGTGGC GATCGGCGCG GCGATCCAGG CCGGCGTGCT GCAGGGCGAC GTCAAGGACG TGCTGCTGCT CGACGTGACC CCGCTGTCGC TGGGCATCGA GACGCTGGGT GGCGTGTTCA CCCGCATCAT CGATCGCAAC ACCACTATCC CGACCAAGAA GAGCCAGGTG TTCTCGACCG CCGAAGACAA TCAGAACGCG GTCACCATCC GGGTCTTCCA GGGCGAGCGC GAAATGGCGG CCGACAACAA GATGCTCGGT CAGTTCGACC TGATGGGCAT TCCGCCGGCC CCGCGCGGCA TGCCGCAGAT CGAAGTGACC TTCGACATCG ACGCCAACGG CATCGTCAAC GTCTCGGCCA AGGACAAGGC GACCGGTAAG GAGCAGCAGA TCCGCATCCA GGCTTCTGGT GGTCTGTCCG ACTCCGAGAT CGACAAGATG GTCAAGGACG CCGAAGCCAA CGCGGCCGAA GACAAGAAGC GCCGCGAGGC GGTCGACGCC AAGAACCACG CCGACGCGCT GGTACATTCC ACCGAGAAGG CGCTGGCCGA GCACGGTTCG AAGGTCGACG AAAGCGAGCG CCGCAGCATC GAAGACGCGC TGAGCGATCT GCGCGAAGCG CTGAAGGGCG ACGACGCCGA GGCGATCAAG GCCAAGAGCA ACACGCTGGC GCAGGCTTCG ATGAAGCTCG GCGAAGCGAT GTACAAGCAG GCAGAAGCCG CCGGCGGTGC GCAGCAGGCC GGTAAGGACG ACGTGGTCGA CGCCGAGTTC ACCGAAGTCG ACGACGACAA GAAGAAGTCG GCGTAA
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Protein sequence | MGKVIGIDLG TTNSCVAVMD GKSAKVIENA EGMRTTPSIV AITDDGERLV GQPAKRQAVT NPERTFFAVK RLIGRRYDDP MVEKDKGLVP YKIVKASNGD AWVEADGKTY SPSQVSAFIL QKMKETAEAH LGQKVDQAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG LDKAKTGTIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDMR LVNYLADEFQ KEQGIDLRKD KLALQRLKEA AEKAKIELSS TTQTEINLPF ITADQSGPKH LTMKLTRAKF EALVDDLVQK TIEPCRKALK DAGLTAGEIS EVVLVGGMTR MPKVQEVVKQ LFGKEPHKGV NPDEVVAIGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRIIDRN TTIPTKKSQV FSTAEDNQNA VTIRVFQGER EMAADNKMLG QFDLMGIPPA PRGMPQIEVT FDIDANGIVN VSAKDKATGK EQQIRIQASG GLSDSEIDKM VKDAEANAAE DKKRREAVDA KNHADALVHS TEKALAEHGS KVDESERRSI EDALSDLREA LKGDDAEAIK AKSNTLAQAS MKLGEAMYKQ AEAAGGAQQA GKDDVVDAEF TEVDDDKKKS A
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