| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0308 |
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| Symbol | hslU |
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| ID | 6407954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 329807 |
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| End bp | 331108 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710218 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001989344 |
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| Protein GI | 192288739 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACT TTTCCCCCCG TGAAATCGTC TCCGAACTCG ACCGCTTCAT CGTCGGCCAG
GCCGACGCCA AGCGCGCGGT CGCCATCGCG CTGCGCAATC GCTGGCGGCG GCTGCAGCTC
GAAGGTAGCT TGCGCGAAGA GGTGCTGCCG AAAAACATCC TGATGATCGG CCCGACCGGC
GTCGGCAAAA CCGAGATCGC CCGGCGACTC GCCAAGCTCG CCGGCGCACC GTTCCTCAAG
GTCGAGGCGA CCAAGTTCAC CGAGGTCGGC TATGTCGGCC GCGACGTCGA ACAGATCATC
CGCGATCTGG TCGAGGTCGC GATCGCGCAG GTGCGCGAGA AGAAGCGCAA GGACGTGCAG
GCGCGCGCCC AGGTCGCCGC CGAGGAACGC GTGCTCGATG CACTGGTCGG GCCCGGCTCG
GGTCCGGCGA CGCGCGACTC GTTCCGCAAG AAGCTGCGCG CCGGCGAACT CAACGACAAG
GAAATCGAGA TCGAGACCCA GGCCGGTTCC GGCTCGCCGA TGTTCGAGAT TCCCGGCATG
CCGGGCGCGC AGATCGGCGC GGTCTCGCTC GGCGACATCT TCGGCAAGAT GGGCGGCCGC
ACCAAGAAGC GGCGGCTGAC AGTAGCCGAC TCCCACGAGA TCCTGGTCAA CGAAGAGGCC
GACAAGCTGC TCGACACTGA TCAGCTGGTG CAGGAAGCGA TCGCTGCGGT GGAGAACAAC
GGCATCGTGT TCCTGGACGA GATCGACAAG ATCTGCGTGC GCGACGGCCG CAGCGGCGGC
GAAGTCTCGC GCGAAGGCGT GCAGCGCGAT CTGTTGCCGC TGATCGAAGG CACCACGGTG
TCGACCAAGC ACGGGGCAGT GAAGACCGAG CACATCCTGT TCATCGCTTC GGGCGCGTTC
CACATCGCCA AGCCCTCCGA CCTGCTGCCC GAGCTGCAGG GACGTCTGCC GATCCGTGTC
GAACTCAATG CGCTCAGCCG AGACGACATG CGCCGCATTC TGACCGAGCC GGAAGCGTCG
TTGATCAAGC AATATGTGGC GCTGATGAAA ACCGAGGGCG TGACGCTGGA CTTCTCCGAC
GACGCCATCG ACGCACTGGC CGATGTGGCG GTGGCGGTGA ACTCCACCGT CGAGAACATC
GGCGCGCGCC GACTGCAGAC CGTGATGGAG CGCGTCCTCG ACGAGATCTC GTTCGTCGCC
CCAGACCGCC ACGGCGAGAC CTTCCAGGTC GATGCAGACT ACGTGAAGAC CAATGTCGGG
GACCTGGCCA AGAACACCGA TCTGAGCCGG TTTATTCTGT AA
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| Protein sequence | MTDFSPREIV SELDRFIVGQ ADAKRAVAIA LRNRWRRLQL EGSLREEVLP KNILMIGPTG
VGKTEIARRL AKLAGAPFLK VEATKFTEVG YVGRDVEQII RDLVEVAIAQ VREKKRKDVQ
ARAQVAAEER VLDALVGPGS GPATRDSFRK KLRAGELNDK EIEIETQAGS GSPMFEIPGM
PGAQIGAVSL GDIFGKMGGR TKKRRLTVAD SHEILVNEEA DKLLDTDQLV QEAIAAVENN
GIVFLDEIDK ICVRDGRSGG EVSREGVQRD LLPLIEGTTV STKHGAVKTE HILFIASGAF
HIAKPSDLLP ELQGRLPIRV ELNALSRDDM RRILTEPEAS LIKQYVALMK TEGVTLDFSD
DAIDALADVA VAVNSTVENI GARRLQTVME RVLDEISFVA PDRHGETFQV DADYVKTNVG
DLAKNTDLSR FIL
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