Gene Rpal_0298 details

Gene Information

• Locus tag: Rpal_0298
• Symbol: rho
• ID: 6407944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 320391
• End bp: 321656
• Gene Length: 1266 bp
• Protein Length: 421 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642710208
• Product: transcription termination factor Rho
• Protein accession: YP_001989334
• Protein GI: 192288729
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGAAA TCAAACTTCA AGACCTGAAG GCCAAGACGC CGGCCGAACT CGTTTCGTTT 
TCGGAAGAGC TCGGGGTCGA GAACGCCAGC ACGATGCGCA AGCAGGAGCT GATGTTCGCC 
TGCCTCAAGC AGTTGTCGGC CAAAGAGACC GACATCATCG GCGAAGGCGT CGTCGAGGTG 
CTGTCCGACG GTTTTGGCTT CTTGCGCTCG CCGGATGCCA ACTACCTTCC CGGTCCGGAC 
GACATTTACG TTTCGCCCTC GCAGATCCGC CGCTTCGGCC TGCGCACCGG TGACACCATC 
GAAGGCCACA TCCGCAGCCC GAAGGAAGGC GAACGCTACT TCGCGCTGCT CAAGGTCAAC 
TCGCTGAACT TCGAGGATCC CGAGAAGTCG AAGCACAAGG TCAATTTCGA CAACCTGACG 
CCGCTGTTTC CGGATGAACG CTTCCGGCTC GAGATCGACG ATCCCACCCG CAAGGATCTG 
TCGGCCCGCG TCATCGACAT CGTCGCCCCG ATCGGTAAGG GCCAGCGCGC TCTGATCGTC 
GCGCCGCCGC GCACCGGTAA GACCGTGCTG ATGCAGAACA TCGCACACTC GATCACGGCG 
AATCACCCAG AGTGCTATCT GATCGTGCTG CTGATCGACG AGCGGCCCGA AGAAGTCACC 
GACATGCAGC GCTCGGTGAA GGGTGAGGTG ATTTCCTCGA CCTTCGACGA ACCGGCGGTT 
CGCCACGTCC AGGTCGCCGA GATGGTGATC GAAAAGGCCA AGCGCCTGGT CGAACACGGC 
CGCGACGTCG TCATCTTGCT CGACTCGATC ACCCGCCTCG GCCGCGCCTA CAACACGGTG 
GTGCCGTCTT CGGGTAAGGT GCTGACCGGC GGTGTCGACG CCAACGCGCT GCAGCGGCCG 
AAGCGATTCT TCGGCGCCGC CCGTAACATC GAAGAGGGTG GGTCGCTTAC CATCATCGCC 
ACTGCGCTGG TCGACACCGG CTCCCGCATG GACGAAGTCA TCTTCGAAGA GTTCAAGGGC 
ACCGGCAACT CGGAGTTGAT CCTCGACCGC AAGGTTGCCG ACAAGCGCAC CTTCCCGGCG 
ATCGACATCT CGCGGTCCGG CACCCGCAAG GAAGAGCTGA TCACCGACCC GCAGCTCTTG 
AAGAAGATGT ACGTGCTGCG CCGTATCCTC AACCCGATGG GGACAATGGA CGCGATCGAG 
TTCCTGCTCG ACAAGCTGCG CAACACCAAG AACAATTCAG AGTTCTTCGA CTCGATGAAC 
ACCTGA 

 

Protein sequence

MREIKLQDLK AKTPAELVSF SEELGVENAS TMRKQELMFA CLKQLSAKET DIIGEGVVEV 
LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN 
SLNFEDPEKS KHKVNFDNLT PLFPDERFRL EIDDPTRKDL SARVIDIVAP IGKGQRALIV 
APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV ISSTFDEPAV 
RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP 
KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVADKRTFPA 
IDISRSGTRK EELITDPQLL KKMYVLRRIL NPMGTMDAIE FLLDKLRNTK NNSEFFDSMN 
T