Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0204 |
Symbol | |
ID | 6407848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 223360 |
End bp | 223956 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642710112 |
Product | periplasmic protein thiol/disulphide oxidoreductase DsbE |
Protein accession | YP_001989240 |
Protein GI | 192288635 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.466624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA CCTTCGATCC CGCCTCGCCG AAGCGCCGCT CCTGGCTGGT GGTGCTGCCG GCGCTGCTGT TCGCTGGGCT GGCGGTGTTG TTCTGGTTTC GGCTGGGCGA CAGCGACGTG TCGCGGATCC CCTCGGCCCT GATCGGGCGG CCAGCACCGC AGACGCCGCT ACCGCCGCTG GACGGCCTGA GCCGTGACGG CAGCCAGGTC GCGGGACTCG ATCCGGCGAT GTTCAAGGGC AAGGTCAGCG TCGTCAACGT CTGGGCGTCG TGGTGCGTGC CTTGCCATGA CGAAGCGCCG CTGCTGATGA CGCTGGCGCA GGACACCCGC ATCCAGCTCG TCGGGATCGA CTACAAGGAC AAGCCCGACA ATGCCCGCCG TTTCCTCGGC CGGTACGGCA ATCCGTTCGC CGCGGTCGGG GTCGATGCCT CGGGCCGCGC TGCGATCGAA TGGGGCGTGT ACGGCGTGCC GGAGACCTTC GTCATCGGGC GCGACGGCAA GATCGCCTAC AAGCTGGTCG GACCGATTAC GCCGGACAAC ATCGAGAAGG TTCTGAAGCC GGAAATCAGC AAGGCGCTGG CGGCGCCGCA GAGCTGA
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Protein sequence | MSDTFDPASP KRRSWLVVLP ALLFAGLAVL FWFRLGDSDV SRIPSALIGR PAPQTPLPPL DGLSRDGSQV AGLDPAMFKG KVSVVNVWAS WCVPCHDEAP LLMTLAQDTR IQLVGIDYKD KPDNARRFLG RYGNPFAAVG VDASGRAAIE WGVYGVPETF VIGRDGKIAY KLVGPITPDN IEKVLKPEIS KALAAPQS
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