| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0187 |
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| Symbol | |
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| ID | 6407831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 205175 |
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| End bp | 206143 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710097 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001989225 |
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| Protein GI | 192288620 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.433088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG ATAAAATTGC TTTGATTGGC TCCGGCCAGA TCGGCGGTAC GCTGGCACAT
TTGGTCGGGT TGAAAGAGCT CGGCGACGTG GTGCTGTTCG ACATTGCCGA GGGCGTGCCG
CAGGGCAAGG CGCTCGACAT CGCGGAGTCC TCGCCGGTCG ACGGTTTCGA CTCCAAGCTG
ACCGGTGCCA ACTCCTACGA GGCGATCGAA GGCGCCCGCG TGGTGATCGT CACCGCCGGC
GTGCCGCGCA AGCCGGGCAT GAGCCGTGAC GATCTGCTCA GCATCAACCT CAAGGTGATG
GAGCAGGTCG GCGCCGGCAT CAAGAAGTAC GCGCCCGACG CGTTCGTGAT CTGCATCACC
AACCCGCTCG ACGCGATGGT CTGGGCGCTG CAGAAGGCCT CGGGCCTGCC GGCCAAGAAG
GTCGTCGGCA TGGCCGGCGT GCTAGACTCG GCGCGGTTCC GTTACTTCCT GGCCGACGAG
TTCAACGTGT CGGTCGAAGA CGTCACCGCC TTCGTGCTCG GCGGCCACGG TGATACCATG
GTGCCGCTGG TGAAGTACTC GACCGTCGCC GGAATTCCGC TGCCCGACCT GGTCAAGATG
GGCTGGACCT CGCAGGCGCG CCTCGACGAG ATCGTCGACC GCACCCGCAA CGGCGGCGCC
GAGATCGTCA ACCTGCTGAA GACCGGCTCG GCGTTCTACG CCCCGGCGTC GTCGGCGATC
GCGATGGCCG AGAGCTATCT GAAGGACAAG AAGCGGGTGG TGCCGGTCGC GGCCCACCTC
AACGGCGAAT ACGGCGTCAA GGACATGTAT GTCGGCGTTC CGGTGGTGAT CGGCGACAAG
GGCGTCGAGC GCATCGTCGA GATCGAGCTG GCCGGCAAGG ACAAGGAAGC GTTCGACAAG
TCGGTCGCTG CCGTTCAGGG TCTGGTCGAG GCCTGCAAGA AGATTGCGCC CGATCTGCTC
GGTCGCTGA
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| Protein sequence | MARDKIALIG SGQIGGTLAH LVGLKELGDV VLFDIAEGVP QGKALDIAES SPVDGFDSKL
TGANSYEAIE GARVVIVTAG VPRKPGMSRD DLLSINLKVM EQVGAGIKKY APDAFVICIT
NPLDAMVWAL QKASGLPAKK VVGMAGVLDS ARFRYFLADE FNVSVEDVTA FVLGGHGDTM
VPLVKYSTVA GIPLPDLVKM GWTSQARLDE IVDRTRNGGA EIVNLLKTGS AFYAPASSAI
AMAESYLKDK KRVVPVAAHL NGEYGVKDMY VGVPVVIGDK GVERIVEIEL AGKDKEAFDK
SVAAVQGLVE ACKKIAPDLL GR
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