| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0165 |
|---|
| Symbol | |
|---|
| ID | 6407809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 179667 |
|---|
| End bp | 180905 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710075 |
|---|
| Product | protein of unknown function DUF610 YibQ |
|---|
| Protein accession | YP_001989203 |
|---|
| Protein GI | 192288598 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCGG ACGAACTAAG CACCCCGCTG GGTCAGAAGC GGAACCGGTG GCAGCGGCTG
CGCCACTACC GGCTGCCGTT CAACGCCACC CAGGGGATCG CGGCCCTTCT CGGCCTATTC
GTGCTGACGT TCCTCGGCTT CGCGCTGTTC GGCAATGATC CGTTCGGCGG CGAGCCGGTG
GTGCGGGTCG AGATCAAGGC AAGCCCCGAC GAGGCGAAGC AGGCCGCCGC CGAGGCCGGC
AAGGATCAAG GCGGCAAACC CGAGAATGCT GCGGCGGCGG GCGCCGAGAA GAAGGACGCC
GAACCGAAGG AAGCGGCCGC CGGGCAGAAG ACCATCACCA TCATCGACGG CTCCAAGGGC
ACGCGCCAGG ACGTCGTGGT CGGCACCGAC AGCCCCGACA AGGCGGAGCC TCCAGCAGGA
CCGACGACCT CAGACGGCAT CAACCCGAAG CTGCTGGAAC AGTCGCGCTA CGGCATGATC
CCGGTGATGG CGGGCGGGCT GAAGCCGTTC TCGGCCTATG CGATGACGAC TGACGCCGAT
CGCGCCAAGG CCGAGCGGAT GCCGACCGTG ACAATCGTGG TCGGCGGGCT CGGGATCGGC
GCGGCGCGCA CCAACGATGC AGTGATGAAG CTGCCGGCCG CGGTGGCGTT GGCCTTCACC
CCGTATGGAT CGGACCCGGG AAAGCTTGCG ACCGAAGCGC GGGCCAAGCG CCACGAGGTC
ATTCTGCAGA TCCCGATGGA GCCGTTCGAT TATCCCGACA ACGACCCCGG ACCGCAGACG
CTGCTGACCT CCAGCGCGCC GGAGCAGAAT CTCGACCGGC TGAATTGGCA TCTCAGCCGG
ATCCAGGGCT ATGTCGGCCT GTCGAATTTC ATGGGCGCGC GGTTCGTCGC CACCGAGCCG
GCGATGCAGG CGATCATCCG CGACGCCGCC AAGCGCGGTC TCGGCTATCT CGACGACGGC
ACCGCCCCGC GCAGCGTCGC CGGAACGCTG GCGAAGTCGC TGGCGATCCC GTTCGCGCGG
GCCGACCTCA CGATCGACCA GGTGCCGGCC GGCGCCGACA TCGACAAGTC GCTGGCGCGG
CTCGAGAGCA TCGCCAAAGA GCGGGGCAGC GCTGTCGGCA TGGCTTCTGC GCTTCCGGTG
ACGATTGAAC GAATTGTCAA CTGGAGCAAG AGCTTGGAGA GTCGGGGGAT CCTCCTGGCG
CCATTGACAA CGGCGATGCT GAAATCAAAA TCAAGTTGA
|
|---|
| Protein sequence | MAADELSTPL GQKRNRWQRL RHYRLPFNAT QGIAALLGLF VLTFLGFALF GNDPFGGEPV
VRVEIKASPD EAKQAAAEAG KDQGGKPENA AAAGAEKKDA EPKEAAAGQK TITIIDGSKG
TRQDVVVGTD SPDKAEPPAG PTTSDGINPK LLEQSRYGMI PVMAGGLKPF SAYAMTTDAD
RAKAERMPTV TIVVGGLGIG AARTNDAVMK LPAAVALAFT PYGSDPGKLA TEARAKRHEV
ILQIPMEPFD YPDNDPGPQT LLTSSAPEQN LDRLNWHLSR IQGYVGLSNF MGARFVATEP
AMQAIIRDAA KRGLGYLDDG TAPRSVAGTL AKSLAIPFAR ADLTIDQVPA GADIDKSLAR
LESIAKERGS AVGMASALPV TIERIVNWSK SLESRGILLA PLTTAMLKSK SS
|
|---|
| |