| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0137 |
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| Symbol | |
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| ID | 6407780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 150131 |
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| End bp | 151990 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710046 |
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| Product | hydrogenase, Fe-only |
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| Protein accession | YP_001989175 |
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| Protein GI | 192288570 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCACGC CCGATCAGGC CAGCCTGTCT GCCCGCGATC CCGCCGAGGC AACGATCACG
CTCTCGATCA ACGGCGTCGC CTGCGCCGGC TTCGCCAACG AGACCATCCT GTCCTGCGCG
CGGCGCTACG ACGTCTACAT CCCGACGCTG TGCGAACTGG AAGACATCGA TCACACCCCC
GGCGCCTGCC GGGTCTGCCT GGTCGAGATC CTGCAGGCCG GCAAGGACAC CCCGCAGATC
GTCACCGCCT GCAACACCCC GGTGCGCGAC GGCATGGAGG TGCAGACCCG CTCCAAGAAG
GCGCGGGACA TGCAGCGTCT TCAGGTCGAA CTGCTGATGG CCGATCATCT GCAGGATTGC
GCCACCTGCA TCCGGCACGG CAGTTGCGAG CTGCAGGATT TGGCACAGTT CGTCGGGCTG
CAGCAGAACC GGTTCTTCGA TCGGGAACGG ACCGAGTCGC GCCCGGTCGA CCACAGCTCG
CCGTCGATGG TGCGCGACAT GCGGCGCTGC GTCCGCTGCC AGCGCTGCGT CGCGATCTGC
CGTTATCACC AGAAGATCGA CGCGCTGGCG ATCGAGGGCA GCGGGCTGGA GCGGATGGTG
GCGCTGCGCG ACGCCGATGG CTACCCGAAT TCGGTGTGCG TCTCCTGCGG CCAATGCGTA
CTGGTGTGCC CGACCGGCGC GCTCGGCGAG CGCGATGAGA CCGATCGGGC GCTCGACTAC
ATCTGCGATC CGGAGGTCGT CACCGTGGTG CAGTTCGCCC CTGCGGTGCG GGTGGCGTTC
GGCGAGGAAT TCGGCCTGCC TGCCGGCACC AATGTCGAAG GCCAGATCAT CGCCGCCTGC
CGCAAGCTCG GCGTCGATGT GGTGCTCGAT ACCAATTTCG CCGCCGACGT GGTGATCATG
GAGGAGGGTG CCGAACTGCT GGCGCGGCTG AAGCAGGGGC GGCGCCCGAC CTTCACGTCC
TGCTGCCCGG CCTGGATCAA CTTCGCCGAG ATCCACTATC CGGACGTGCT GCCGCTGCTG
TCCTCGACCA AGTCGCCGCA GCAGGTACTG TCGACGATCG CCAAGAGCTA TCTGCCGGCA
CAGCTCGGCG TTCCGGCCGA GCGTATCCGG GTGATTTCGA TCATGCCGTG CATCGCCAAG
AAGGACGAGG CGGTGCGGCC GCAGATGGTC CATGACGGGC AGCCCGAAAC CGACCTGGTG
CTGACCACGC GCGAATTCGC CCGGCTGCTG CGGCGCGAGG GCATCGATCT GAAGGATCTG
CCGTCGTCGC AGTTCGATCG TCCGTTCCTC AGCGCCTATT CCGGTGCCGG TGCCATCTTC
GGCACCACCG GCGGCGTGAT GGAAGCCGCG GTGCGGACCA TCTACGCGCT GGTGAACGGC
CGCGAACTGG ATCGGATCGA GCTGACGCAG CTGCGCGGCT TCGAAGGGCT GCGCGAGGCA
ACTGTCGATC TCGGCGGCCC GGTCGGCGAG GTCAAGGTCG CGATGGTTCA CGGCCTCGGC
GACACGCGCC GGCTGGTGGA ATCGGTGCTG AGCGGCGAAG CCAACTACGA TTTCATCGAG
GTGATGGCCT GTCCGGGCGG CTGCGTCGAC GGCGGCGGGT CGCTGCGTTC GAAGAAGGCG
TATCTGCCGC TGGCGCTGAA GCGCCGCGAG ACCATCTACA ATGTCGACCG CGCCGCCAAG
GTCCGGCAGT CGCACAACAA TCCGCAGGTG CAGGTGCTGT ACCGCGAACT GCTGCAGGCG
CCCAATTCGG AAATCGCGCA TCGGCTGCTG CACACCCACT ACGCGTCGCG CAAACGCGAG
CTGCAGCACA CCGTGAAGGA GATCTGGGAC GATCTCACCA TGAGCACGAT CCTGTACTGA
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| Protein sequence | MCTPDQASLS ARDPAEATIT LSINGVACAG FANETILSCA RRYDVYIPTL CELEDIDHTP
GACRVCLVEI LQAGKDTPQI VTACNTPVRD GMEVQTRSKK ARDMQRLQVE LLMADHLQDC
ATCIRHGSCE LQDLAQFVGL QQNRFFDRER TESRPVDHSS PSMVRDMRRC VRCQRCVAIC
RYHQKIDALA IEGSGLERMV ALRDADGYPN SVCVSCGQCV LVCPTGALGE RDETDRALDY
ICDPEVVTVV QFAPAVRVAF GEEFGLPAGT NVEGQIIAAC RKLGVDVVLD TNFAADVVIM
EEGAELLARL KQGRRPTFTS CCPAWINFAE IHYPDVLPLL SSTKSPQQVL STIAKSYLPA
QLGVPAERIR VISIMPCIAK KDEAVRPQMV HDGQPETDLV LTTREFARLL RREGIDLKDL
PSSQFDRPFL SAYSGAGAIF GTTGGVMEAA VRTIYALVNG RELDRIELTQ LRGFEGLREA
TVDLGGPVGE VKVAMVHGLG DTRRLVESVL SGEANYDFIE VMACPGGCVD GGGSLRSKKA
YLPLALKRRE TIYNVDRAAK VRQSHNNPQV QVLYRELLQA PNSEIAHRLL HTHYASRKRE
LQHTVKEIWD DLTMSTILY
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