Gene Rpal_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0115 
Symbol 
ID6407758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp127157 
End bp127945 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID642710024 
Productprotein of unknown function DUF81 
Protein accessionYP_001989153 
Protein GI192288548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.117057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGC TGATCGCCGA GGCGTCTGCG AGTTTCCTGT CGACGCTGCC GTCGCCGATG 
GCGATCGTGG GCGTGCTGAG CGCGGTCCTC GCGGCCGCCC TGCTGCGCGG CTTCACCGGG
TTCGGCTTCG CGCTCGCTGC AGTTCCACTG ATGGGCATGT TCATGCCGCC GGCGAAGGCG
GTGCCGGTCG CCGTGCTGCT GCAACTGCTC GGCGGCCTCA ATGATCTTCG CCGCAACCAT
CGTGATGCCC ACTGGGCGTC ACTGCGCTGG CTGATCGTCG GCGCGGTGAT CGGGTCGCCG
ATCGGAGCGC TGGCACTCAG CGTTGCGCCG GCGCCGGTGG CACGGATCGT GATCGCGACC
ATCACGGCCG CGGCGGTGGT CGTGCTCGGC CGCGGCTTTG CGATCGAGAA GATTCCATCG
CGGCCGGTCA CGACGGCGGT CGGCATGTTG TGCGGTCTGT TCAACGGCCT CGCCGCGATG
CCGAGCCCGC CGGCGATCGT GTACTACATG TCGGGGCCGT TTCGCGCGGT CGCGGTGCGC
GCCTCGCTGT TGGTGTTCTT CCTTGCCACC TCGATCGCCG GTTTCACGAG CATTGCGCTG
GTCGGCCTTG CGACCGTGAA TGTGCTGTGG CTGGCCGCGA TGGCGCTGCC GGTGATGATG
CTCGGGACCT GGATCGGCGA ACAGGGTTTC CGCCGCGGCA CCGAGCGGCT GCATCGCCGC
GTCTCCATCG CCAGCCTCGG CGGCGTCGCG CTGCTGAGCG CCGCGAAGGG GCTCTCCGAG
CTGATGTGA
 
Protein sequence
MHELIAEASA SFLSTLPSPM AIVGVLSAVL AAALLRGFTG FGFALAAVPL MGMFMPPAKA 
VPVAVLLQLL GGLNDLRRNH RDAHWASLRW LIVGAVIGSP IGALALSVAP APVARIVIAT
ITAAAVVVLG RGFAIEKIPS RPVTTAVGML CGLFNGLAAM PSPPAIVYYM SGPFRAVAVR
ASLLVFFLAT SIAGFTSIAL VGLATVNVLW LAAMALPVMM LGTWIGEQGF RRGTERLHRR
VSIASLGGVA LLSAAKGLSE LM