Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0102 |
Symbol | |
ID | 6407745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 111313 |
End bp | 112371 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642710011 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001989140 |
Protein GI | 192288535 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATCC ATGAAGATCT GCGCCCGGCC GACGGCGATC CGTATCTGCT CGACGTCAAC GACCTCGTGG TGCACTTCCG CACCGGCCGT AAGCGGCCGT GGGGTAAACC GTCTTTCGTT CATGCGGTCG ACGGCGTCAG CTTCCGCGTC AAGCGGGGCA CCACCTTCGG CATCGTCGGC GAAAGCGGCT CGGGCAAATC GACCACCGCG CAGGCGATCA TGCGGCTGGT GCAGGCGACC TCAGGGCAGG TGGTGTTTCG CGGCGAAGAC ATCATGCCGC TCACCGGCGA GCCGCTGCGC AAGGCGCGGA AGCACCTGCA GATCGTGTTT CAGGACCCGT TCTCGGCGCT CGATCCGCGC CGCCGCGCCG GCGACCAGAT CCGCGAGCCG CTCGATCTGC TCGAGATCGG CAGCCGCAGC GAACGCGACG CCCGGGTGCG CAAGCTGCTC GCCGAGGTCG GCCTGCCGCC GGAGGCGGCC GATCTGTTTC CGCATCAGTT TTCGGGCGGC CAGCGGCAGC GGCTGTGCAT CGCGCGCGCA CTGGCGCCGG AGCCCGAGCT GATCGTCTGC GACGAGGCGG TGTCGGCGCT GGACGTTGCG ATCCAGGCGC AGATCCTTAA CCTTCTGAAG AAACTGCAGC GCGAGCGCGG CCTTACCTAC ATCTTCATCT CGCACGATCT CGGCGTCATC CAGCAGTTCT GCGACGAGAT CGCCGTGATG TATCTCGGCA AGATCGCCGA ACAGGCGCCG GCCTCGGCGC TGTTCACCGC GCCGCGTCAT CCTTACACAT GGTCGCTGGT GTCGGCCGCC GTGCCGCCCG GTCCGCTGCG TGACGAGCTG AAGGCCAAGT ATCTGGTTAA GGGCGAGCCG CCGTCGCCGG TCGATCCGCC GCCCGGCTGC CGCTTCGCGC AACGCTGCCC GTTTGCCGAG GCGCGCTGCC GGGCAGAGTT GCCCTTTCTC GACGCCGCCG GCCACGAACA CTACGTCGCC TGCCATCGCA AGGATGAGAT CGGTGTCCCC GATTTCGCGC CGCGCGTGGC GAGTGGGCCG ATCGGTTAG
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Protein sequence | MMIHEDLRPA DGDPYLLDVN DLVVHFRTGR KRPWGKPSFV HAVDGVSFRV KRGTTFGIVG ESGSGKSTTA QAIMRLVQAT SGQVVFRGED IMPLTGEPLR KARKHLQIVF QDPFSALDPR RRAGDQIREP LDLLEIGSRS ERDARVRKLL AEVGLPPEAA DLFPHQFSGG QRQRLCIARA LAPEPELIVC DEAVSALDVA IQAQILNLLK KLQRERGLTY IFISHDLGVI QQFCDEIAVM YLGKIAEQAP ASALFTAPRH PYTWSLVSAA VPPGPLRDEL KAKYLVKGEP PSPVDPPPGC RFAQRCPFAE ARCRAELPFL DAAGHEHYVA CHRKDEIGVP DFAPRVASGP IG
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