| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0099 |
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| Symbol | |
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| ID | 6407742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 106242 |
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| End bp | 107468 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710008 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001989137 |
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| Protein GI | 192288532 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGCC TGTTTCACGC GAACCTCTGT CCCACTCGCG CGAAGACGCT GCACTTCCTG
CCGTCCGTCC GGAGCCTGTT CATGTCGCCT GTTGTTCGCC GCCCCGCGCT CGCCCTCGTC
GCGCTGCTCG CCGCCTCTCC TGCTTTGGCT CAGATGCCGG GCGGCGGGCC GCCGGCGGTC
GGCACGATCA CCGCCAGGCC GCAGGCGATC ACCGAGACCA CCGAGATCAA CGGCCGGATT
CAGGCGATCG GACGCGTCGA TCTCACCGCG CGCGTCAACG CCTATCTGCA GGAGCAGCTG
TTCGTCGAAG GCGCCGAGGT GAAGAAGGGC GATCTGCTGT TCCGGCTGGA GCAACCGCCG
TTCGAGGCCG ATGCCGAGGC CAAGCGCGCC GCGGTCGATC AGGCCCAGGC CCAGCTCGAC
TACGCCGATC TGGCGCTCGG CCGCGCCGAG CAATTATTGA AGACCAGTTC CGGCAGCCAG
AGCACCGCCG ACAACGCCCG CGCGGCGCAG CGCACCGCCG CGGCGCAGCT CCGCTCGGCG
CAGGCGCAAT TGCGCCAGTC CGAGATCAAT CTCGGTTACA CCGAAATCCG CTCGCCGATC
GACGGCCGGA TCGGCCGCAT CCAGGTGACG CTCGGCAATG TGGTCGGACC GTCGTCCGGT
GCGCTCGCCA CGGTGGTCAG CCAGGATCCC GCTTACGTCG TGTTCCCGAT CTCGGTGAAC
CGGCTGCTGC AACTGCGCGA GGAATTCGCC GCGCAGGGCG GGCTCGAGGC GATGAAGATC
AGGCTGCGAC TGCCCGACGG CCGGCTGTAC CGCGAGGTCG GCAAGCTGCA GTTCGTCGAC
GTCGCCGTCG CGCGCGACAC CGACAGCATC ATCCTGCGCG GCACCATCGC CAATCCGCCG
CTCGCCGGCG GCGGCCGCGA ACTGACCCAC GATGAGATGG TCCGTGTGCT TCTCGAAGGC
TCCAAGCCGC GCGAGGTGCT GGCGATCCCG CGAGCCGCGA TCCTGACCGA CCAGCAGGGC
GACTACGTCT ACGTGGTCAG CGACAAGAAC GTCGCCGAGC GGCGCCGGGT CAAGCTCGGA
CAATCCACCG CGCAGATCGC CTCGGTGATC GACGGGCTGA AGGCCGGCGA CCAGGTGATC
GTCGAGGGCG TGCAGCGGGC GCGCCCGAAT GCACCCGTGA CACCGACGCC CGCCGCCGCC
ACGACCGCCC TGCCGACCCC GAGATAA
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| Protein sequence | MTRLFHANLC PTRAKTLHFL PSVRSLFMSP VVRRPALALV ALLAASPALA QMPGGGPPAV
GTITARPQAI TETTEINGRI QAIGRVDLTA RVNAYLQEQL FVEGAEVKKG DLLFRLEQPP
FEADAEAKRA AVDQAQAQLD YADLALGRAE QLLKTSSGSQ STADNARAAQ RTAAAQLRSA
QAQLRQSEIN LGYTEIRSPI DGRIGRIQVT LGNVVGPSSG ALATVVSQDP AYVVFPISVN
RLLQLREEFA AQGGLEAMKI RLRLPDGRLY REVGKLQFVD VAVARDTDSI ILRGTIANPP
LAGGGRELTH DEMVRVLLEG SKPREVLAIP RAAILTDQQG DYVYVVSDKN VAERRRVKLG
QSTAQIASVI DGLKAGDQVI VEGVQRARPN APVTPTPAAA TTALPTPR
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