Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0057 |
Symbol | ugpC |
ID | 6407699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 60099 |
End bp | 61190 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642709965 |
Product | glycerol-3-phosphate transporter ATP-binding subunit |
Protein accession | YP_001989095 |
Protein GI | 192288490 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.923196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGATG TCGTTCTCCG CAATGTCCGC AAGACCTATC CGGGTGGCTT CGAGGCCATC AAGGGTGTCG ATTTCGCGGT CGGCGATGGC CAGTTCTGCG TGCTGGTCGG CCCCTCCGGC TGCGGCAAGT CCACGCTGCT AAGGATGGTC GCCGGGCTGG AAACGATAAC CGCAGGCGAA ATCGAGATCG GCGGCCGTGT CGTCAACGAC GTCGAGCCGG CCGATCGCGA TATCGCGATG GTGTTTCAGA ACTACGCGCT CTACCCGCAT ATGACTGTGT ACAACAACAT GGCTTACGGG CTGCGCAATC GCGGCATGGC CAAGGCGGAG ATCGACGCGC GGGTGCAGGA AGCGGCGCGC ATCCTCGAAC TCGGTCCGAT GCTCACCCGC AAGCCGCGGC AATTGTCCGG CGGCCAGCGC CAACGGGTCG CGATGGGCCG CGCGATCGTG CGGCACCCCA AGGTGTTTCT GTTCGACGAG CCGTTGTCCA ATCTTGACGC CAAGCTGCGG GTCGCGATGC GGGTCGAAAT CCGCAAGTTA CAGCGCCGGC TAGCCACCAC GGCGATTTAC GTCACCCATG ACCAGCTCGA GGCGATGACG CTGGCCGATG TGCTTGTGGT GATGAATGGC GGGCAGGTCG AACAGATCGG TTCGCCGCTC GACGTCTACG CCAAGCCGGC GACGACCTTC GTGGCTTCGT TCATCGGCGC ACCGCCGATG AACCTGCTGA CCCTGGCAGA CGATCTGCGG AATGAGCTCG GTGGCACCCC GGCGGAGGCG GGCATTCTCG GCGTTCGCCC GGAGGACCTC GTCATCGGCC CAGGGGCGGC AGCTCAAGGC GGATTGGCAC TCGATATCAC CGTCGAGGCG ATCGAGCGGG TCGGGCCGGA GACGTTCGTC TATGGGGTTC GAGCCGGGCA TGAGGCGCGG CCGGTGGTCG CTGGGAAACC CGGCGAAGGG GCCGGGGGGG ATGTCATCGT CCGGATTCCC GGCCAAGCTG CGCCGCCGGT CGGCGAGCGC ATTACGGTCG CGGCCGCTCC ACACAGCCTG CATCTGTTTT CCGCCGACGG GCGCCGCCGG ATTGCCGGCT AG
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Protein sequence | MADVVLRNVR KTYPGGFEAI KGVDFAVGDG QFCVLVGPSG CGKSTLLRMV AGLETITAGE IEIGGRVVND VEPADRDIAM VFQNYALYPH MTVYNNMAYG LRNRGMAKAE IDARVQEAAR ILELGPMLTR KPRQLSGGQR QRVAMGRAIV RHPKVFLFDE PLSNLDAKLR VAMRVEIRKL QRRLATTAIY VTHDQLEAMT LADVLVVMNG GQVEQIGSPL DVYAKPATTF VASFIGAPPM NLLTLADDLR NELGGTPAEA GILGVRPEDL VIGPGAAAQG GLALDITVEA IERVGPETFV YGVRAGHEAR PVVAGKPGEG AGGDVIVRIP GQAAPPVGER ITVAAAPHSL HLFSADGRRR IAG
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