Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0050 |
Symbol | |
ID | 6407692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 54394 |
End bp | 55344 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642709958 |
Product | ABC transporter related |
Protein accession | YP_001989088 |
Protein GI | 192288483 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.161692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGTC GGCGCGGCCC GAAAGCTCCC GGGTTTGGCG GCGCGCGGAA CGATATCACC GGCTACGGCA ACGAGGTCGG CGATCTGCTC ACCACGCCAG TGCGCGACGC ACCGCCGATC GCCCGCAGCG ACGCCTATGC GACGCCGCAG CGACAACCGG CCGCGGCTGC GCCGCCGCGC CGCGCCGCCG CCGCGGCGCA ATCGGCAGCG CCACAAGCCG TGCCGGCATC CAGTTACTTG GCGGTGCACA GCGTCGAGAA GAGTTTCGGC ACCCGCAAGA TCGTACGCGG TGTCAGCATC TATGTTCGCC GCGGCGAAGC GGTCGGGCTG CTCGGCCCCA ACGGCGCCGG CAAAACCACC GTGTTCTACA TGATCACCGG CTTGATCAAG GCCGATAACG GCGCGATCGA ACTCGACGGC CACGACGTCA CCAAGCTGCC GATGTATCAG CGTGCCCGCC TCGGTATCGG TTACCTGCCG CAGGAAGCCT CGATCTTCCG CGGCCTTACC GTCGAGCAGA ACATCCGCGC GGTGCTGGAA GCGGTCGAAC CGGACAAGCG CAAGCGCGAA GCCCAGCTCG ACAATCTGCT GCAGGAATTC AACATCGAAC GCTTGCGCAA GTCGCCGTCG ATCGCACTGT CGGGCGGTGA GCGTCGCCGC GTCGAAATCG CCCGCGCGCT CGCCAGCCGC CCGAACTACA TGCTGCTCGA CGAGCCGTTC GCCGGTATCG ACCCGATCGC GGTCGGCGAC ATTCAGGACC TAGTGCGGCA TCTGACCAAT CGCGGCATCG GCGTGCTGAT CACCGATCAC AACGTCCGCG AAACGCTGGG CCTGACCGAT CGCGCCTACA TTGTCTATGC GGGCGAGATC CTGACTGAGG GCACGCCCGA AGAGATCGTC AACGACCCGG ACGTGCGCCG GCTTTACCTT GGCGAGGAAT TCCGGCTGTG A
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Protein sequence | MFRRRGPKAP GFGGARNDIT GYGNEVGDLL TTPVRDAPPI ARSDAYATPQ RQPAAAAPPR RAAAAAQSAA PQAVPASSYL AVHSVEKSFG TRKIVRGVSI YVRRGEAVGL LGPNGAGKTT VFYMITGLIK ADNGAIELDG HDVTKLPMYQ RARLGIGYLP QEASIFRGLT VEQNIRAVLE AVEPDKRKRE AQLDNLLQEF NIERLRKSPS IALSGGERRR VEIARALASR PNYMLLDEPF AGIDPIAVGD IQDLVRHLTN RGIGVLITDH NVRETLGLTD RAYIVYAGEI LTEGTPEEIV NDPDVRRLYL GEEFRL
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