Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0010 |
Symbol | |
ID | 6407651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 12809 |
End bp | 13318 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642709917 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_001989048 |
Protein GI | 192288443 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.103438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA TCGACAGCGT CGTCGCCGAA TCCAACCGTC GGCTTGATGC GATTGACCGC AAAATTCTGA CCGTGCTGCA GCAGGACGCC TCACTGTCCG TGGCCGAGAT CGGCGATCGG GTCGGGCTGT CGTCGACCCC GTGCTGGAAG CGTATCCAGC GGCTCGAGGC CGACGGAGTG ATCATCAAGC GGGTGGCCCT GGTCGATCAG GACAAAATCG GGTTGGGGCT GTCGGTGTTC GTCTCGATCG AGAGCGGCGA TCACTCCGAT GCCTGGCTGA AGACGTTTGC CGATGCCGTC AGTGCGATGC CCGAGGTGAT CGAGTTCTAC CGGATGGCCG GCGACGTCGA CTACATGCTG CGGGTGGTCG TCGCGGACAT GCGCGCCTAC GATCAGTTCT ACAAGAAGCT GATCGGCACC GTGCCGCTGA AGAACGTCAC GTCGCGCTTT GCGATGGAGA AGATCAAGTC GGTGACGGCG CTGCCGGTGC CGCCGATGCC GGTATCTTAA
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Protein sequence | MTDIDSVVAE SNRRLDAIDR KILTVLQQDA SLSVAEIGDR VGLSSTPCWK RIQRLEADGV IIKRVALVDQ DKIGLGLSVF VSIESGDHSD AWLKTFADAV SAMPEVIEFY RMAGDVDYML RVVVADMRAY DQFYKKLIGT VPLKNVTSRF AMEKIKSVTA LPVPPMPVS
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