Gene RoseRS_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4549 
Symbol 
ID5211534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5706779 
End bp5707489 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID640598127 
Productiron dependent repressor 
Protein accessionYP_001278830 
Protein GI148658625 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATA CAACGCGACA TGCCAGAGCG CGGCGCAAGC CGGGCGACGC CGGACCGACC 
GAAAAGATGC GCGAGTATCT GGAAGTCATC TACTATCTGG CGGCGCGTGG CGAACCGGTG
ATCAGCGCGC GTCTGGCGGA ATGGATGCAT GTCACCCCGC CGACGGTCGC CGATATGGTG
AGCCGAATGG AGGATCGCGG CTACATTATG CGCGATGGGC GCGGTGAGAT TTCGCTGACC
GATGAAGGTT TTCGTCTGGC GGAAGCGATG GTGCGGCGAC ATCGCATCCT GGAGCGTTTC
CTGGTGGATG TGATGGGGTT GCAGTGGCAT GAAATTCACG AGGAGGCGGT GCGCCTGGAA
CATGCTCTCT CGCCGCGCCT GGAGGAGCGC ATCGAGGAAC TCGTCGGCGA CGCCGCTACC
TGCCCCCACG GCAATCCCAT TCCAGGGCGC TGCGCCTCGT ACACGGGTTC AGTGCGCCTC
GATCAGGTCG CGCCGGGAGG GGTATTCACG CTGCGGCGCA TCTCTGAGGA AGCCGAAGAA
GATACCGTTC TGATCCGCTA CCTGCAAAAC AGTCATCTGG TGCCGGGTGA GCGTTTCGCC
ATTATTGATT GCTCTCCGGT CTATGGTGTC ACCCTCCAGC GCGACGACCG ACAGATCACC
CTGTCGCCGC AGATCGCCGC GTACCTGTGG GGAGATGTGA CCGCTACCTG A
 
Protein sequence
MADTTRHARA RRKPGDAGPT EKMREYLEVI YYLAARGEPV ISARLAEWMH VTPPTVADMV 
SRMEDRGYIM RDGRGEISLT DEGFRLAEAM VRRHRILERF LVDVMGLQWH EIHEEAVRLE
HALSPRLEER IEELVGDAAT CPHGNPIPGR CASYTGSVRL DQVAPGGVFT LRRISEEAEE
DTVLIRYLQN SHLVPGERFA IIDCSPVYGV TLQRDDRQIT LSPQIAAYLW GDVTAT