Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4522 |
Symbol | |
ID | 5211507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5669897 |
End bp | 5671183 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598100 |
Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001278803 |
Protein GI | 148658598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA TGCATCTACT CGAACGCGCC GTTATCGATG CCATCGATAC CGACGGCTTA CTGGCGTTTC TCGGCGATCT GGTCGCTCTT CCAAGCCTCG ACGGATCACC CGACGAACAG GCGGCGCAGG AGTATGTTGC GGCATTCCTG GAACGCCAGG GGTTCGAGAT GGATGTCTGG GAGATCGACT TCGACACGTT GCGTCGTCAT CCGTCATTTT CGGCAGAGGT GGAACGTCAG CGCGGATCGG GCGTCGTTGG AATGCTGGGA ATGGGAGAAG GACCGACGTT GATCTTCAAC GGACACGTCG ATGTTGTACC GGCTGGTGAT CAGGCGCTCT GGCGTTTTCC ACCCTGGCGG ACGACAATCG CTGACGGCTT TGTGTACGGA CGTGGCGCGC TCGATATGAA GGGGGGGCTG GCCTGCGCAG TGTTTGCCGC GAAAGCCATC CGTGACGCCG GTGTTCGCCT GAAGGGGCGT CTGCTGATCC AGAGCGTCAT TGGCGAGGAA GATGGCGGGT GCGGCACGCT TGCCACAGTG CTGCGCGGTC ACACCGGTGA TGGCGCGATT GTGGTCGAAC CGACCGGACT GTGCATTGCG CCGGCACAGG CGGGCGCGCT CAACTTTCGC CTGACCGTAC CCGGCGCTGC GGCGCACGGC TGTGTGCGTG AAGAAGGAGT CAGCGCGATT GAACTGTTCA TCCCTCTTTA CCGGGCATTG ATGGATCTTG AAGCCAGGCG CAACGCCGAA GCGCGGCGCA GAGACGATGC GGTCAGCCGT CTCTACGCCC GCTACACCAC GCCCTACGCT CTGAGCATCG GCGTGGTGCG CGCTGGCGAA TGGGCATCGA CCGTCGCCGA AACCCTGGTT GCTGAAGGAC GGTACGGCGT TGCGGTGGGT GAAAACCTGG CAGAAGCGCG GCGGATGCTG GAGGAAACTG TTGCGCACGC TGCCCAGGCA GACCCCTGGC TTCGTGAGCA TCTACCGCAT CTGGAGTGGT GGGGAGGTCA GTTCGCCCCG GCAAGCACGC CGCTCGACCA TCCCCTGGTT GAAACGACCG CCGCAGCATT CGCAGCGATC ACCGGCGTAC CGGCAACCCT GGAAGGCATG ACCTACGGCG CCGACATGCG GTTACTGGTT CACGACGGGC GCACCCCGAC CATTCTGTTC GGACCGGGGG ATGTGCGCGA TGCGCATCGC CCCAATGAGC GCGTCGCAAT CGCCGACCTG GAGACCGCGA CGCGCACACT GGCGTTGACG GCGCTACGCT TCTGCGGGGT TGGATAG
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Protein sequence | MTGMHLLERA VIDAIDTDGL LAFLGDLVAL PSLDGSPDEQ AAQEYVAAFL ERQGFEMDVW EIDFDTLRRH PSFSAEVERQ RGSGVVGMLG MGEGPTLIFN GHVDVVPAGD QALWRFPPWR TTIADGFVYG RGALDMKGGL ACAVFAAKAI RDAGVRLKGR LLIQSVIGEE DGGCGTLATV LRGHTGDGAI VVEPTGLCIA PAQAGALNFR LTVPGAAAHG CVREEGVSAI ELFIPLYRAL MDLEARRNAE ARRRDDAVSR LYARYTTPYA LSIGVVRAGE WASTVAETLV AEGRYGVAVG ENLAEARRML EETVAHAAQA DPWLREHLPH LEWWGGQFAP ASTPLDHPLV ETTAAAFAAI TGVPATLEGM TYGADMRLLV HDGRTPTILF GPGDVRDAHR PNERVAIADL ETATRTLALT ALRFCGVG
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