| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4478 |
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| Symbol | |
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| ID | 5211463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5615401 |
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| End bp | 5616687 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640598057 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001278760 |
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| Protein GI | 148658555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000434229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000716178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACCTGC GTTCGCCAAA ACTCTTTTTG TTCCTGACCG TCTTGATCGA TCTGCTCGGT
ATCGGCATTG TGTTGCCGCT GATGCCGTAC TATCTCAAGA TCGTCGAGCA GTCGAGCATT
CCATGGCTGG CAGCCAATCG CGCGATCATC GTCGGCGCAT TGATGGCGTC CTTTGCGCTG
ATGCAGTTTC TCTTCACACC GGTGCTCGGC GCTCTGTCCG ACCGGTATGG GCGCCGACCG
ATCCTGCTCA TCAGCGTCCT GGGCAGCGGG CTGTCGTATG TGCTGTTCGG GTTTGCCGAA
TACCTGTCGT TTCTTGGGGT CGAAACAGTC CTGGCAATCC TGTTTATCGG TCGGATGCTG
AGCGGAATTA CCGGCGCAAG TATTTCGACT GCGCAGGCAT ACATTGCCGA CACGACCACC
CCCGAAGAGC GCACGAAGGG CATGGGCATG ATCGGCGCAG CATTCGGTCT GGGTTTCATG
CTCGGTCCGG CGCTCGGCGG ATTGTTGAGC ACAATCAGCC TGGAAGCGCC AGCATTCGTT
GCCGCCGGTC TTGCATTCGC AAATGTGATC TTTGGTTACT TCAAGTTGCC GGAGTCGCTG
CCGCCTGAGC GACGCATGGT CACGCCGATG CGTGGGATGA ATCCGGTGTC GCGCCTGAGC
GCGCTGTTGC GGCGATCCAG CATTCGTCCG CTGCTGATCG GCATCTTCCT GCTCAATATG
GCATTTTCCG GCTTGCAGAG CAACTTTGCC GTGTTCAGCG ATGTGCGCTT CGGTTTCGGT
CCGCTCGATA ATGCGCTGAT CTTCACGCTG GTCGGGTTGC TGGCGGTGGT GATGCAGGGT
TTTCTGATCC GCCGTTTGGT GCTTGCCTTT GGTGAGACGC GACTGGCAAT CGCTGGCATG
ACGATGATGG CAGGCGCATT CATTGCGGTC GCCCTGGCGC CGGAGGCATG GATGCTCTTC
CCGGCGGTTG GCGCCATCGC TATTGGTGAT GGAATGGCAA CACCGGCGTT GACCGGTCTG
ATCTCGCGGC GGGTGGACGC GCACGAGCAG GGAGCGACGC TGGGCGGGAC GCAGGGGCTG
ATCAGCCTGA CGCGGATCGC TGCGCCGATC CTGGCAGGTA CGACGTTCGA TCTGATCAAC
GTGAGTGCGC CATATTACCT GGGCGGCGCG CTGATCGCCG TGGCCGTCGC AGTTGTCGGT
TCGGCGTTGT TGCCAGCATT GCGGAGCGGC GTTGGTCATG ATCAGCCGCA GGGTGCGGTG
ATGATCGGAA GCGCAAAAGC GGAATGA
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| Protein sequence | MNLRSPKLFL FLTVLIDLLG IGIVLPLMPY YLKIVEQSSI PWLAANRAII VGALMASFAL
MQFLFTPVLG ALSDRYGRRP ILLISVLGSG LSYVLFGFAE YLSFLGVETV LAILFIGRML
SGITGASIST AQAYIADTTT PEERTKGMGM IGAAFGLGFM LGPALGGLLS TISLEAPAFV
AAGLAFANVI FGYFKLPESL PPERRMVTPM RGMNPVSRLS ALLRRSSIRP LLIGIFLLNM
AFSGLQSNFA VFSDVRFGFG PLDNALIFTL VGLLAVVMQG FLIRRLVLAF GETRLAIAGM
TMMAGAFIAV ALAPEAWMLF PAVGAIAIGD GMATPALTGL ISRRVDAHEQ GATLGGTQGL
ISLTRIAAPI LAGTTFDLIN VSAPYYLGGA LIAVAVAVVG SALLPALRSG VGHDQPQGAV
MIGSAKAE
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